Detailed information on CNT30338041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30362117Eragrostis tefSorghum bicolor20.9726.3293.8565forward

Expression of CNT30338041

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LDVPALHDEAHRGERPVPRHPHGHRHAAGSPPPRHQGLRRHGAPQEARPDTTGMLAVTGDHCCRGYCSCGGHALSTDSFFLSFWQW*

>peptide 2 (31 aa)
MLSRLILSFFLSGNGSAMRLNEAGRRGWGMN*

>peptide 3 (56 aa)
LTFLPCMMRRTEESGPSHAIRTDTDTPPALRRPATRGCVATARPRKPDRTQQACWL*

Sequence

>CNT30338041
CTTGACGTTCCTGCCCTGCATGATGAGGCGCACCGAGGAGAGCGGCCCGTCCCACGCCATCCGCACGGACACCGACACGCCGCCGGCTCTCCGCCGCCCC
GCCACCAGGGGCTGCGTCGCCACGGCGCGCCCCAGGAAGCCCGACCGGACACAACAGGCATGCTGGCTGTGACGGGTGACCACTGCTGCCGGGGCTATTG
CAGCTGCGGCGGCCATGCTCTCTCGACTGATTCTTTCTTTCTTTCTTTCTGGCAATGGTAGTGCGATGAGATTGAATGAGGCTGGAAGAAGGGGATGGGG
GATGAACTAA