Detailed information on CNT30337201


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FJG1|SAU19_ARATH, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090059Cynara cardunculusSolanum tuberosum21.6810.5486.2580forward
CNT3087148Cynara cardunculusVigna radiata31.4419.5981.9116forward
CNT30508399Cynara cardunculusSolanum lycopersicum35.561.7982.44131forward
CNT30206448Cynara cardunculusHelianthus annuus55.2844.3580.88204forward
CNT30623724Cynara cardunculusDaucus carota20.0516.1985.1474forward
CNT30356900Cynara cardunculusLactuca sativa44.4416.7984.15164forward

Expression of CNT30337201

Peptides detected in this lncRNA

>peptide 1 (32 aa)
QTRSKISEYVFVAWNGEATHWMDVPKFFLCLI*

>peptide 2 (30 aa)
KREARSVNMSSLHGMVRPPIGWMYPNSSSV*

Sequence

>CNT30337201
CAAACGAGAAGCAAGATCAGTGAATATGTCTTCGTTGCATGGAATGGTGAGGCCACCCATTGGATGGATGTACCCAAATTCTTCCTCTGTTTGATATAAT
AATTCTTGAAATGCAGGTTGGCTTAACAATGATACTGGAACCACAAATCTCTTCTTCTCTTGTTCCCCAACATAAACAGCAAAATAACCTTTAGGGATGG
CCATGTATGTATTGCTGCTTCCATTTGACAATGATCGTCGGAGAATTTGTTTTGCTTGAATGATCCGAGGCATAAGAATGGCCATTTTTCTAAGGAGCGG
ACAGTCTTTGTTTGCTTTGCTCTAAAGGCTGATGAAGGAAGAAAAAGCTCAAACTAATCCTTGGTGAAG