Detailed information on CNT30335982


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531232Cynara cardunculusEucalyptus grandis99.396.2288.523259reverse complement
CNT30318007Cynara cardunculusCorylus avellana81.1776.2290.472664forward
CNT30550233Cynara cardunculusIpomoea triloba57.4666.990.31886reverse complement
CNT30519180Cynara cardunculusJuglans regia97.1796.4389.973189reverse complement
CNT30619309Cynara cardunculusSesamum indicum53.3879.7589.041752forward
CNT3021656Cynara cardunculusCitrullus lanatus101.0454.7789.723316reverse complement
CNT30508033Cynara cardunculusNicotiana attenuata92.0290.6989.013020reverse complement
CNT3047210Cynara cardunculusPrunus dulcis77.9779.5588.672559reverse complement
CNT30311297Cynara cardunculusCamelina sativa59.296.4788.471943reverse complement
CNT30433917Cynara cardunculusPapaver somniferum78.7694.8389.092585reverse complement
CNT30583181Cynara cardunculusEchinochloa crusgalli69.0796.7287.62267reverse complement

Expression of CNT30335982

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSYSFVRVSRRAEWGARRPVLGTRRCRGTL*

>peptide 2 (29 aa)
MPKVLPRPPFPPTHRGLALAPTTGCRSRS*

>peptide 3 (64 aa)
MLTLEPFLEDQGWSAVHPTRGIPPISFLASCGFTHPLTRTHVILLCPCFKTGRMGCPQAGAGNA*

>peptide 4 (53 aa)
MSTTGRASHSVLRIFKGYRGRTGHEAMYGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 5 (40 aa)
MIGRADIKESKSNVTMNKPIILVVTFMTPLASNSEGLKDC*

>peptide 6 (39 aa)
DESERRSVESQWIVAARPLCHLQYPVTYLSRLQRILPAA*

>peptide 7 (38 aa)
MCRPSQTPHLYMSSARIGPPRRALGPKIGALPCFRFME*

>peptide 8 (34 aa)
MAHFELSFPWYGSTKQSRRPTYLKFSNRSRALRP*

>peptide 9 (30 aa)
MCKCYSHGTCPLFGLQNSHLNICYYHQDPH*

>peptide 10 (66 aa)
MARAANHDRRDGISTGISTARALAAAPIHTGPCPESIGGPALAVPHPTGTHRRPPSASLXTISSTI*

Sequence

>CNT30335982
GACGAATCTGAGCGACGTAGTGTTGAATCTCAGTGGATCGTCGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCACGTATTTAAGTCGCCTGCAAA
GGATTCTACCCGCCGCTTGATGGGAATTGTACTTCAAGGCGGCCTGCACGACTCGTCCGTTGCACGGGCTTGGCCAACAACACGTGCCTTTGGGAGCTGA
GGCCGCTACTGCTGGTCGGCAAACAGGCGGCGGGCATACGCGTCGCTTCTAGCCCAGATTCTGACTTAGAGGCGTTCAGTTATAATCCAGCGCACTGTAG
CTTTGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTCTGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGACACTGTCATCAG
TAGGGTAAAACTAACCTGTCTCACGACGGTTTAAACCCAGCTCACTTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTGAACTCTGCTTCACAATGA
TAGGAAGAGCCGACATCAAAGAATCAAAAAGCAACGTCACTATGAACAAGCCAATTATCCTTGTGGTAACTTTTATGACACCTTTAGCTTCAAATTCCGA
AGGTCTAAAGGATTGTTAGGCCACACTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCCACACGAGATTTTCT
GTTCTTGTTGAGCTCATCTCTGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGTATATGTCTTCTGCCCGGATTGGC
CCTCCGAGGCGAGCCTTGGGTCCAAAAATAGGGGCATTGCCCTGCTTCCGATTCATGGAATAAGTAAAATAACGTTAAAGGTAGTAGTATTTCACTTTCG
CCCGAGGGCTCHCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAG
CCCGTTCCMTTGGYTGTGGTTTCGCTGGATAGTAGACAGKRAMAGTGGGAATCTCGTTAATCCATTCATGMGCGTCACTAATTAGATGACGAGGCATTTG
GCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCCGCGTTGAATTTCTTCACTTTGACATTCAGAGCACTAGGCAGAAATCACATTGCGTTAGCA
TCCGTAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCTCTTGTCCGTACCAGTTCGGAGTTGGCTGTTTGACACCCGGGGAAGGCCCC
CAAAGAGGTCGTTCCCAGTCCGTCACCCGGCTGGCACGCGACGACCCGCTCTCTCCACGGAAACAGCTTGAGTAGTTCGCCGACAGCCGACGGGTTCGGG
ACTGGGACGCCTGTGCCCAACCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTACGGACTTCCTTTGCCTACATTGTTCCATCGACCAGAG
GTTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGCCTCCCACTCGGTCCTCCGGATTTTTAAGGGCTATCGGGGGCGCACCGGACA
TGAAGCGATGTACGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGACTGAGTCGATTCCAGGGTGGGCAGGCTGTTAAACAAAAAAGATAACTCTTCTCG
AGGCCACCGCCGACGTCTCCGGACTCCCTAACATTGTCGTCAGCTGCCACGTCTCGGTTCAGGAATTTGAACCCGATTCCCTTTCGAAGCTCGCGCGAAA
CACGCTATCTGACGGGCTTCCCCCGCTTCTTAGGATCGACTAACCCATGTGCAAGTGCTATTCACATGGAACCTGTCCGCTCTTCGGCCTTCAAAATTCT
CATTTGAATATTTGCTACTACCACCAAGATCCACACTGACGGCCGCTCATGCCCAAGGTTTTGCCGCGACCGCCATTCCCTCCTACTCATCGGGGCCTGG
CACTTGCCCCGACGACCGGGTGTAGGTCGCGCTCTTAAGCGCCATCTATTTTCGGGGCTAGTTGATTCGGTAGGTGAGTTGTTACACACTCCTTAGCGGA
TTTCGACTTCCATGACCACCGTCGTGCTGTCTTAATCGACCAACACCTTTTGTCGGTTCTAGGTTAGCGCGCAGTTTGGCACCGTAGCCCGACTTTCGGT
TCATCCCGCATCGCCAGTTCTGCTTACCAATAATGGCCCACTTTGAGCTCTCATTTCCGTGGTACGGCTCAACGAAGCAGTCGCGCCGTCCTACCTATTT
AAAGTTTTCGAATAGGTCGAGGGCGTTGCGCCCTTGATGCCTCTAATCATTTGCTTTACCCGATAGAACTCGCACCCGGGCTCCAGCTATCCTGAGGTAA
TCGTCGGAGGAACCAACTACTAGACAGTTCGATAGACAGTTCGATTAGTCTTTCGCCCCTTTACCCAATTCAGACGAACGATTTGCACGTCAATATCGTT
GCGGGCCTCCACCAGAGTTTCCTCAGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTTGAACCCTTCTTAG
AAGATCAAGGTTGGTCGGCGGTGCACCCCACGAGGGGGATCCCGCCAATCAGCTTCCTTGCGTCTTGCGGGTTTACTCACCCGTTGACTCGTACACATGT
CATACTCCTTTGTCCGTGTTTCAAGACGGGCCGAATGGGGTGCCCGCAGGCCGGTGCTGGGAACGCGTAGGTGTCGAGGCACGCTGTGATGGCGCGCGCT
GCCAACCACGATCGACGCGACGGCATCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCACCAATCCACACCGGTCCATGCCCTGAGTCGATCG
GCGGACCGGCTCTCGCCGTTCCACATCCAACCGGGACGCATCGCCGGCCCCCATCCGCTTCCCTCMCGACAATTTCAAGCACTATTTGACTCTCTTTTCA
AAGTCCTTTTCATCTTTCCCTCGCGGTGCTTGTTTGCTATCGATCTCACGGCGATATTTAGCCTTGGACGGAATTTACCGCCCTATTGGGGCTACATTCC
CAAACAACCCGACTCGCAGACAGCGCCTCGTGGTGCGACAGGGTCCAGGCACGACGGGGCTCTCGCCCTCTCTGGCTCCCCCTTCCAGGGGAGTTGGGCC
CGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGGCGAGGCTGCCCGATTTTCAAGTTGGGATGTTCCCGGTT