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Detailed information on CNT30334961


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550295Cynara cardunculusIpomoea triloba55.1310092.741171forward
CNT3089434Cynara cardunculusVigna radiata55.9874.1790.581189forward
CNT30206613Cynara cardunculusHelianthus annuus49.9160.9995.091060forward
CNT30355977Cynara cardunculusLactuca sativa59.9372.793.791273forward
CNT3027145Cynara cardunculusPopulus trichocarpa54.5270.7893.781158reverse complement

Expression of CNT30334961

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRAALKYNSHQEAGRILCRRLKYVTGYCKWQSGLAATIH*

>peptide 2 (41 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLMSSAR*

>peptide 3 (40 aa)
MNRKPGYGAKLRANLEPIKGVGRLRHQDSGHGSRKPLRSV*

>peptide 4 (35 aa)
MPVGTQKMMNYALAGRSQRKLWWRPAAILMCKSFV*

Sequence

>CNT30334961
AAGGTGCAAGGAAGCTGATTGGCGGGATCCCCCTCGCGGGGTGCACCGCCGACCGACCTTGATCCTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGG
GACCCAAAAGATGATGAACTATGCCTTAGCCGGGCGAAGCCAGAGGAAACTTTGGTGGAGGCCCGCAGCGATACTGATGTGCAAATCGTTCGTCTGACTT
GGGTATAGGGGCGAAAGACTAATCGAACCGTCCAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAAGATAGTTGGAGCCCGGGTGCGAGTTCTATCATGTAA
AGCGAATGATTAGAGGCATCGGGGGCGCAACGCCCTYGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGACTGCTTCATTGAGCCGTGCCACGGA
ATTGAGGGCTCCAAGTGGGCCATTTTTGGTAAGCATAACTGGTGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGTGCTAACCTAGAAC
CCATAAAGGGTGTTGGTCGATTAAGACACCAGGACAGTGGTCATGGAAGTCGAAAGCCGCTAAGGAGTGTGTAACAACTCACCTGCCAAATCAACTAGCC
CCGAAAAAGGATGGCGCTTAAGCGCACGACCTACACCCCGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCAGCGGTCGCTGCAAAACCT
TAGGCGCGAGCCCGGGCGGAGCGGCCGTCGTTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCA
TGTGAACGACACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAATCCCGTTAGATAGCGCGTTTCACGCGAGCTTCGAAAGGGAATCGGGTTAAA
ATTCTTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAATCTGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGC
ACACCTTAGAATTGTCTAAGTCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGCGGTGTCCGGTATGCCCCCGGCGGCCCTTGAAAATCC
AGAGGACCGAGTGCCTCCCACGCCCGATCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGCAGGCAAGGGAAGT
CGGCAAAATGGATACGTAACCTCGGAAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTTATGTCTTCTGCTCGATA
ACGGGCAGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGTAGGTGTCCTAAGATGAGCTCAACGAGAAGAGAAAT
CTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCKTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCRGAAT
TTGAAGCTAGAGGTGTCAGAAAAGTTACCATAAGGATAACTGGCTTGTGGCAACCAAGCGTTCATAGCGATGTTGCTTTTTGATCCTTCGATGTCGGCTC
TTCCTATCATTKTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACATGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTT
ACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAAGAACCGTTGATTCGCAAAATTGGTCATCGTGCTTGGTTGAAAAGCCAGTGGC
GCGAAGCTACCGTGCGCTGGATTATAACTGAACGCCTCTAAGTGAGAATCCGGGCTAGAAGCGACGCGTGTGCCCGCCGCCTGTTTGCCGACCAGCAGTA
GGGGCCTCGGCCCCCAAAGGCACGTGTCGTTGGCCAAGCTCGTGCGACGAACGAGTCATGCGGGCCGCCTTGAAGTACAATTCCCATCAAGAGGCGGGTA
GAATCCTTTGCAGACGACTTAAATACGTGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTAAGATTCAGCTCTGCGTCACTCAGA
TTCGTCCCTCCCCCCCAAAGCATG