Detailed information on CNT3033485


BLAST search results

BLAST vs Swiss-Prot:
sp|Q942D4|BURP3_ORYSJ, E-value = 8e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516848Theobroma cacaoJuglans regia21.0419.7384.2789forward

Expression of CNT3033485

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MQGHCCSGMHILFQKEKSNIWIIMDLSLGGCIIVNKSSWVNIYRLSLVSCVHRYSSTFATHIYGGATTRLSFSCIDVYTTSPYIDRGTFVL

>peptide 2 (75 aa)
LIVFFIISAPADPGFTENLFKISGNLSDENSIFWAMWRGKKVAVSVFSVKCRVIVALGCISFSRKKRATFGSSWT*

Sequence

>CNT3033485
TTAATTGTGTTCTTCATTATCTCAGCTCCCGCTGATCCAGGTTTCACTGAAAACTTGTTCAAAATTTCTGGCAACTTGTCAGATGAAAATAGTATCTTTT
GGGCAATGTGGCGAGGTAAGAAAGTTGCCGTCTCTGTATTTTCAGTGAAATGCAGGGTCATTGTTGCTCTGGGATGCATATCCTTTTCCAGAAAGAAAAG
AGCAACATTTGGATCATCATGGACTTGAGTCTCGGTGGCTGCATAATTGTAAATAAATCCTCCTGGGTTAACATATACCGGCTTTCCCTTGTGTCCTGTG
TTCACAGATACTCCTCCACCTTTGCCACCCACATTTACGGAGGTGCCACCACCCGGCTTTCCTTTTCCTGTATTGACGTTTACACCACCTCCCCCTACAT
TGACAGAGGTACCTTTGTTCTCC