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Detailed information on CNT30334114


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-149

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Cynara cardunculusNymphaea colorata50.557.6980.991152forward
CNT3019912Cynara cardunculusCitrullus lanatus39.9854.5882.02912forward
CNT30311185Cynara cardunculusCamelina sativa48.6283.7680.971109forward

Expression of CNT30334114

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MSSQRSAYRHGVVEPSEESIPSECCSLQESDRPPAAYPQRSTSAGLVGSPPCLGFSLSHCRSCLNSRLPT*

>peptide 2 (34 aa)
MNLTKPRHKSQTTEYSTSRLENTILFDRIRIMNR*

>peptide 3 (41 aa)
KRNGLKEVKGPSNLFISRQKNDIKHVFTCESVYHNTKRTKS*

>peptide 4 (31 aa)
MVSELXTSNVMVFPVNVLXKICIPPLRRSTK*

Sequence

>CNT30334114
TGAAGAGAAATGGCCTTAAAGAGGTGAAGGGGCCGAGTAACTTGTTTATATCGCGTCAAAAAAATGACATAAAACACGTATTCACATGTGAATCAGTTTA
CCATAATACCAAAAGAACTAAGTCATAGATAAACCAGATTACCACATAACATTGTTCATAACAATAACAATAAACACAACCAGCAACAAACACGGATTTC
AATTACTTCCACAAACCAACACTTGGCTTCAATTCCCACCACGAAGTCGAAGAACAAGGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCTGCAAGAGT
CCTTCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCGTA
TCCGAACTCTCCACCTCCAACGTAATTGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCATACCGCCACGGAGTCGTAGAACCAAGTGAAGAGTCGATT
CCTTCTGAATGTTGTAGTCTGCAAGAGTCCGACCGTCCTCCAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTG
GATTTTCGCTTTCACATTGTCGATCGTGTCTGAACTCTCGACTTCCAACGTGATAGTCTTTCCGGTCAACGTCTTAACGAAGATCTGCATACCGCCTCTT
AGACGGAGGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAGATCAATCTCTGCT
GGTCTGGTGGAATCCCTTCTTTGTCTTGGATTTTCGCTTTCACGTTATCGATGGTGTCCGAGCTTTCRACTTCCAACGTGATGGTCTTTCCAGTCAACGT
CTTAACRAAGATCTGCATACCACCTCTGAGACGAAGCACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAATCGGCGAGGGTACGGCCATCTTCCAGC
TGTTTGCCGGCAAAGATCAATCTCTGTTGGTCKGGGGGAATRCCTTCCTTATCCTGGATCTTKGCTTTCACGTTGTCGATCGTGTCAGAACTCTCRACTT
CCARTGTGATTGTCTTYCCAGTGAGGGTCTTGACGAAGATCTGCATCCCTCCACGGAGACGGAGGACAAGGTGGAGTGTGGACTCCTTCTGAATGTTGTA
ATCGGCCAAAGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACG
TTATCGATTGTATCAGAACTCTCGACCTCGAGAGTGATCGTCTTTCCAGTTAGGGTTTTAACGAAGATCTGCATCTGTAGACAAAGAAACCAACAATAAG
AATCCATAGAACAAATTCAACTTCGAAGAATCGGATAGAAACGGATGAATTTAACAAAACCTCGACATAAATCACAAACCACAGAATATTCTACATCACG
TCTAGAGAACACGATTTTATTTGACAGAATTCGGATCATGAACAGGTGAGGAAGAAAATTATCCAACAGAATATCCAATTTTAACCTCAGGTCATAAAAA
GCGTCGGATCTAGGGTTTCAGAACACGGAATAAAATAAACTCCTCAAACAAAAGATCAAATTAAACCCCAGACATAAAAAAGTGACGGAAACACGAAATC
TTCAACCTACAAAATGAATTTCAACCGAAAAAATGAAGCACAGCTTCGATACCTAATTGAACACAAAAAACTTATCTTGTTGTAAAGCATAGATGATAGA
ATCAGAACTCAATTATACACCTTAGAAGTCGCCGATATTTCAATCGGAAAGCTTCCTAGACCGTTGAACAAAAAATCAACCACACAATTTCAGATCTAAT
CAACCAGTTTATCAAAATAGAAGTATACCAAACCAAAACCACCACCCATCAAATCAAAACCTCAAAATCAAACGATTCAAAAACACAAGAATCAAACAAT
CAAAACAGAAAATCAAGAACAAGAAAAAGGGGGGAATCACGATACCTTGAGAGAAATGAAGAACAGGAACAGATATCAATTGAAAAGAGATTGTTTTCGA
TTGCTTTGGTGATGAGGGAAGAACAGATATGGGGGTGGATTTATAGGAAGAGGAGGAAGGGGTCGGTCAGAGCGTAGGATTATTATCGTGACACGTGTAC
GGTGGAAATTAAAAGGTGTTGCTGTCAGGCTCTGCACCACACGGCAGGGAATAGTATCTAGAGAAGGAGCGTAGTCGTGTA