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Detailed information on CNT30334108


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Cynara cardunculusNymphaea colorata38.1350.283.56888forward
CNT30279009Cynara cardunculusChenopodium quinoa55.2284.1680.641286forward
CNT30709517Cynara cardunculusGlycine max38.4796.4582.03896forward
CNT30637458Cynara cardunculusCapsicum annuum58.7831.1881.151369forward
CNT30568725Cynara cardunculusActinidia chinensis46.7293.7981.251088forward
CNT30174646Cynara cardunculusVigna angularis37.0582.8283.66863forward
CNT30114615Cynara cardunculusEutrema salsugineum38.6491.7483.89900forward

Expression of CNT30334108

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNLTKPRHKSQTTEYSTSRLENTILFDRIRIMNR*

>peptide 2 (40 aa)
RNGLKEVKGPSNLFISRQKNDIKHVFTCESVYHNTKRTKS*

>peptide 3 (70 aa)
MSSQRSAYRHGVVEPSEESIPSECCSLQESDRPPAAYPQRSTSAGLVGSPPCLGFSLSHCRSCLNSRLPT*

>peptide 4 (31 aa)
MVSELXTSNVMVFPVNVLXKICIPPLRRSTK*

Sequence

>CNT30334108
AGAGAAATGGCCTTAAAGAGGTGAAGGGGCCGAGTAACTTGTTTATATCGCGTCAAAAAAATGACATAAAACACGTATTCACATGTGAATCAGTTTACCA
TAATACCAAAAGAACTAAGTCATAGATAAACCAGATTACCACATAACATTGTTCATAACAATAACAATAAACACAACCAGCAACAAACACGGATTTCAAT
TACTTCCACAAACCAACACTTGGCTTCAATTCCCACCACGAAGTCGAAGAACAAGGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCTGCAAGAGTCCT
TCCATCCTCAAGTTGCTTCCCCGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCGTATCC
GAACTCTCCACCTCCAACGTAATTGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCATACCGCCACGGAGTCGTAGAACCAAGTGAAGAGTCGATTCCT
TCTGAATGTTGTAGTCTGCAAGAGTCCGACCGTCCTCCAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGGAT
TTTCGCTTTCACATTGTCGATCGTGTCTGAACTCTCGACTTCCAACGTGATAGTCTTTCCGGTCAACGTCTTAACGAAGATCTGCATACCGCCTCTTAGA
CGGAGGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAGATCAATCTCTGCTGGT
CTGGTGGAATCCCTTCTTTGTCTTGGATTTTCGCTTTCACGTTATCGATGGTGTCCGAGCTTTCRACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTT
AACRAAGATCTGCATACCACCTCTGAGACGAAGCACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAATCGGCGAGGGTACGGCCATCTTCCAGCTGT
TTGCCGGCAAAGATCAATCTCTGTTGGTCKGGGGGAATRCCTTCCTTATCCTGGATCTTKGCTTTCACGTTGTCGATCGTGTCAGAACTCTCRACTTCCA
RTGTGATTGTCTTYCCAGTGAGGGTCTTGACGAAGATCTGCATCCCTCCACGGAGACGGAGGACAAGGTGGAGTGTGGACTCCTTTTGAATGTTGTAGTC
GGCGAGAGTACGGCCGTCCTCGAGCTGCTTCCCAGCGAAGATCAACCTTTGCTGATCTGGAGGAATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTG
TCGATCGTGTCAGAACTCTCGACTTCCAATGTGATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATCCCTCCACGGAGACGGAGGACAAGGTGGA
GTGTGGACTCCTTCTGAATGTTGTAATCGGCCAAAGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGAATTCCTTC
CTTATCCTGGATTTTAGCCTTGACGTTATCGATTGTATCAGAACTCTCGACCTCGAGAGTGATCGTCTTTCCAGTTAGGGTTTTAACGAAGATCTGCATC
TGTAGACAAAGAAACCAACAATAAGAATCCATAGAACAAATTCAACTTCGAAGAATCGGATAGAAACGGATGAATTTAACAAAACCTCGACATAAATCAC
AAACCACAGAATATTCTACATCACGTCTAGAGAACACGATTTTATTTGACAGAATTCGGATCATGAACAGGTGAGGAAGAAAATTATCCAACAGAATATC
CAATTTTAACCTCAGGTCATAAAAAGCGTCGGATCTAGGGTTTCAGAACACGGAATAAAATAAACTCCTCAAACAAAAGATCAAATTAAACCCCAGACAT
AAAAAAGTGACGGAAACACGAAATCTTCAACCTACAAAATGAATTTCAACCGAAAAAATGAAGCACAGCTTCGATACCTAATTGAACACAAAAAACTTAT
CTTGTTGTAAAGCATAGATGATAGAATCAGAACTCAATTATACACCTTAGAAGTCGCCGATATTTCAATCGGAAAGCTTCCTAGACCGTTGAACAAAAAA
TCAACCACACAATTTCAGATCTAATCAACCAGTTTATCAAAATAGAAGTATACCAAACCAAAACCACCACCCATCAAATCAAAACCTCAAAATCAAACGA
TTCAAAAACACAAGAATCAAACAATCAAAACAGAAAATCAAGAACAAGAAAAAGGGGGGAATCACGATACCTTGAGAGAAATGAAGAACAGGAACAGATA
TCAATTGAAAAGAGATTGTTTTCGATTGC