Detailed information on CNT30334096


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615967Cynara cardunculusSesamum indicum52.5133.9680.471142forward

Expression of CNT30334096

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNLTKPRHKSQTTEYSTSRLENTILFDRIRIMNR*

>peptide 2 (37 aa)
MVSELSTSNVIVLPVNVLTKICIPPLRRRTKCRVDSF*

>peptide 3 (37 aa)
MVSELSTSNVMVFPVNVFTKICIPPRRRRTRWSVDSF*

>peptide 4 (70 aa)
MSSQRSAYRHGVVEPSEESIPSECCSLQESDRPPAAYPQRSTSAGLVGFPPCLGFSPSRCRWCPNSRLPT*

>peptide 5 (51 aa)
FFEPKIIDKPDYHITLFITITINTTSNKHGFQLLPQTNTWLQFPPRSRRTR*

Sequence

>CNT30334096
TTTTTTGAACCAAAAATCATAGATAAACCAGATTACCACATAACATTGTTCATAACAATAACAATAAACACAACCAGCAACAAACACGGATTTCAATTAC
TTCCACAAACCAACACTTGGCTTCAATTCCCACCACGAAGTCGAAGAACAAGGTGAAGAGTAGACTCTTTCTGAATATTGTAGTCTGCAAGAGTCCTTCC
ATCCTCAAGTTGCTTCCCCGCAAAGATCAACCTCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCGTATCCGAA
CTCTCCACCTCCAACGTAATTGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCATACCGCCACGGAGTCGTAGAACCAAGTGAAGAGTCGATTCCTTCT
GAATGTTGTAGTCTGCAAGAGTCCGACCGTCCTCCAGCTGCTTACCCGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATTTT
CGCCTTCACGTTGTCGATGGTGTCCGAACTCTCGACTTCCAACGTGATCGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCATACCACCTCTTAGACGC
AGAACCAAGTGCAGAGTTGATTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCAAGTTGCTTACCGGCGAAGATCAATCTCTGCTGGTCTG
GTGGAATCCCTTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCGATGGTATCCGAGCTTTCGACTTCCAACGTGATGGTCTTCCCGGTCAACGTCTTCAC
GAAGATCTGCATCCCACCACGGAGACGGAGGACAAGGTGGAGTGTGGACTCCTTTTGAATGTTGTAGTCGGCGAGAGTACGGCCGTCCTCGAGCTGCTTC
CCAGCGAAGATCAACCTTTGCTGATCTGGAGGAATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCGATCGTGTCAGAACTCTCGACTTCCAATG
TGATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATCCCTCCACGGAGACGGAGGACAAGGTGGAGTGTGGACTCCTTCTGAATGTTGTAATCGGC
CAAAGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACGTTATCG
ATTGTATCAGAACTCTCGACCTCGAGAGTGATCGTCTTTCCAGTTAGGGTTTTAACGAAGATCTGCATCTGTAGACAAAGAAACCAACAATAAGAATCCA
TAGAACAAATTCAACTTCGAAGAATCGGATAGAAACGGATGAATTTAACAAAACCTCGACATAAATCACAAACCACAGAATATTCTACATCACGTCTAGA
GAACACGATTTTATTTGACAGAATTCGGATCATGAACAGGTGAGGAAGAAAATTATCCAACAGAATATCCAATTTTAACCTCAGGTCATAAAAAGCGTCG
GATCTAGGGTTTCAGAACACGGAATAAAATAAACTCCTCAAACAAAAGATCAAATTAAACCCCAGACATAAAAAAGTGACGGAAACACGAAATCTTCAAC
CTACAAAATGAATTTCAACCGAAAAAATGAAGCACAGCTTCGATACCTAATTGAACACAAAAAACTTATCTTGTTGTAAAGCATAGATGATAGAATCAGA
ACTCAATTATACACCTTAGAAGTCGCCGATATTTCAATCGGAAAGCTTCCTAGACCGTTGAACAAAAAATCAACCACACAATTTCAGATCTAATCAACCA
GTTTATCAAAATAGAAGTATACCAAACCAAAACCACCACCCATCAAATCAAAACCTCAAAATCAAACGATTCAAAAACACAAGAATCAAACAATCAAAAC
AGAAAATCAAGAACAAGAAAAAGGGGGGAATCACGATACCTTGAGAGAAATGAAGAACAGGAACAGATATCAATTGAAAAGAGATTGTTTTCGATTGCTT
TGGTGATGAGGGAAGAACAGATATGGGGGTGGATTTATAGGAAGAGGAGGAAGGGGTCGGTCAGAGCGTAGGATTATTATCGTGACACGTGTACGGTGGA
AATTAAAAGGTGTTGCTGTCAGGCTCTGCACCACACGGCAGGGAATAGTATCTAGAGAAGGAGCGTAGTCGTGTA