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Detailed information on CNT30333336


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42699|METE_CATRO, E-value = 3e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30211114Cynara cardunculusHelianthus annuus17.0925.6395.0861reverse complement

Expression of CNT30333336

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MYLMPTSDICFQMDDLRSADTFCKSSALLLPSQNDSRANFSSLLGPIRG*

Sequence

>CNT30333336
AGTTGGTGTCGAACCACTTGGTCATTTCCATAGCAGGGACAGAGGCATTTCCTCTGGCCATTGAGAAGTAAGTGTCAAAACCAATTTCACCACCGTTCCA
GTTGTATCTTGGGGGGACGGCACCGAGCATGGTAGTGGTGTCAAGAACTTGGTCATAGTAAGAGAAAGTGTTGCTGGGGATGTACTTGATGCCAACATCA
GACATTTGTTTCCAGATGGATGATCTGAGATCAGCAGACACATTCTGCAAATCCTCAGCACTGCTCTTGCCATCCCAGAATGATTCAAGAGCGAATTTCA
GCTCTCTCTTGGGTCCCATACGGGGATAACCGACGATGTGAGATGCCATTGTTCTGT