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Detailed information on CNT30333335


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42699|METE_CATRO, E-value = 3e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440702Cynara cardunculusAegilops tauschii66.1171.5283.05236forward
CNT30689646Cynara cardunculusTriticum urartu47.6259.0385.88170forward
CNT30721908Cynara cardunculusTriticum spelta66.1174.4583.05236forward

Expression of CNT30333335

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MYLMPTSDICFQMDDLRSADTFCKSSALLLPSQKDSRANFSSLLGPIRG*

Sequence

>CNT30333335
AGTTGGTGTCGAACCACTTGGTCATTTCCATAGCAGGGACAGAGGCATTTCCTCTGGCCATTGAGAAGTAAGTGTCAAAACCAATTTCACCACCGTTCCA
GTTGTATCTTGGGGGGACGGCACCGAGCATGGTAGTGGTGTCAAGAACTTGGTCATAGTAAGAGAAAGTGTTGCTGGGGATGTACTTGATGCCAACATCA
GACATCTGTTTCCAGATGGATGATCTGAGATCAGCAGACACATTCTGCAAATCCTCAGCACTGCTCTTGCCATCCCAGAAAGATTCAAGAGCGAATTTCA
GCTCTCTCTTGGGTCCCATACGGGGATAACCGACGATGTGAGATGCCATTGTTCTGT