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Detailed information on CNT30331679


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9GFL8|RR7_DIOBU, E-value = 3e-93

BLAST vs NONCODE:
NONOSAT000698, E-value = 2e-173

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Dioscorea rotundataOryza sativa74.1660.4891.54508forward
CNT30678391Dioscorea rotundataSetaria viridis52.5557.3295.28360forward
CNT30617775Dioscorea rotundataSesamum indicum65.9968.2893.14452forward
CNT3021516Dioscorea rotundataCitrullus lanatus25.699.5796.59176forward
CNT30730546Dioscorea rotundataCorchorus capsularis87.59101.5295.33600forward
CNT30406883Dioscorea rotundataBeta vulgaris38.1101.5687.36261forward
CNT30524944Dioscorea rotundataPhaseolus vulgaris24.9617.1795.32171forward
CNT30201813Dioscorea rotundataPisum sativum49.3420.6290.83338forward
CNT30710142Dioscorea rotundataGlycine max24.5337.6794.05168forward
CNT30284960Dioscorea rotundataTriticum aestivum87.367.3490.8598forward
CNT30384007Dioscorea rotundataTriticum turgidum95.7775.1490.85656forward
CNT30569656Dioscorea rotundataActinidia chinensis98.3980.0595.55674forward
CNT30543269Dioscorea rotundataBrassica napus10023.1496.35685forward
CNT30509374Dioscorea rotundataSolanum lycopersicum30.0710389.32206forward
CNT30136937Dioscorea rotundataLolium perenne63.6568.9991.06436forward
CNT3018230Dioscorea rotundataZea mays75.1871.2391.26515forward
CNT30607385Dioscorea rotundataGossypium raimondii22.7714.7787.82156forward
CNT30230544Dioscorea rotundataAnanas comosus27.7439.1898.42190reverse complement
CNT30351849Dioscorea rotundataEragrostis tef12.4121.3688.2485reverse complement
CNT30356947Dioscorea rotundataLactuca sativa43.9459.695.35301forward
CNT30153780Dioscorea rotundataPrunus persica42.7732.7495.9293forward
CNT30416238Dioscorea rotundataPapaver somniferum26.1323.3797.21179forward
CNT30150659Dioscorea rotundataBrachypodium distachyon13.1438.4693.3390forward
CNT30100515Dioscorea rotundataOryza rufipogon14.0137.888.5496reverse complement
CNT30115844Dioscorea rotundataOryza nivara74.7458.7891.8512forward
CNT3049028Dioscorea rotundataCucumis sativus24.6758.2897.04169forward

Expression of CNT30331679

Peptides detected in this lncRNA

>peptide 1 (53 aa)
SFLRMASPLPLAASTNSELNLKAIFRPGRFRDAPNNQRMASAFPCVDPISIGT*

Sequence

>CNT30331679
CTTCCTTTTTACGTATGGCATCGCCACTCCCTTTGGCAGCATCTACTAATTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACGTTTTCGGGATGC
CCCTAATAACCAACGAATGGCAAGTGCTTTTCCTTGTGTAGATCCTATTTCAATAGGAACTTGATGAGTCGATCCGCCTACACGTCTTGCTTTTACTGCT
ATATCGGGAGTTACTCCACGTATTGCTTGACGTAAAACAGATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGTTCGATAGATAATTTGAT
AAGCCAATGATTTTTTTCCGTGTTTCAGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATCGGATTTTGCAGTTTTTTCTTCTGC
AGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAGAATCAGTTTTCTTTTTATAAGGGCTAAAAACGAATCACTTATTTTGGCTTTTTTACCCCATA
TTGTAGGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCCCGAACAATGTGATATCTCACACCCGGTAAATCTTTAACCCTTCCTC
CTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAGGTTAATCG