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Detailed information on CNT30331560


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST004927, E-value = 4e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678225Dioscorea rotundataSetaria viridis34.8554.1593.75176forward
CNT30524663Dioscorea rotundataSetaria italica34.8530.2495.45176forward
CNT30641718Dioscorea rotundataNymphaea colorata63.7659.5292.55322reverse complement
CNT30549212Dioscorea rotundataIpomoea triloba64.5510.8191.72326reverse complement
CNT30730494Dioscorea rotundataCorchorus capsularis63.7636.5992.24322reverse complement
CNT30632284Dioscorea rotundataVigna unguiculata97.6260.290.47493forward
CNT30294119Dioscorea rotundataTriticum aestivum32.0859.3494.44162reverse complement
CNT30220801Dioscorea rotundataHordeum vulgare30.339.4394.77153forward
CNT30384830Dioscorea rotundataTriticum turgidum34.8529.9894.89176forward
CNT30569398Dioscorea rotundataActinidia chinensis63.7616.4893.17322reverse complement
CNT30442196Dioscorea rotundataAegilops tauschii34.8520.7595.45176reverse complement
CNT30660220Dioscorea rotundataTriticum dicoccoides34.8551.9294.89176reverse complement
CNT303548Dioscorea rotundataZea mays34.8512.3695.45176reverse complement
CNT30215429Dioscorea rotundataHelianthus annuus63.7645.7493.17322reverse complement
CNT30688674Dioscorea rotundataTriticum urartu34.8513.3695.45176forward
CNT30720843Dioscorea rotundataTriticum spelta37.6288.3783.68190reverse complement
CNT30347837Dioscorea rotundataEragrostis tef34.8522.8394.89176reverse complement
CNT30363261Dioscorea rotundataSorghum bicolor34.8513.8395.45176forward
CNT30620564Dioscorea rotundataCajanus cajan63.966.2490.4323forward
CNT30596724Dioscorea rotundataOryza meridionalis34.857.2896.02176reverse complement
CNT30410880Dioscorea rotundataPapaver somniferum63.7635.5493.17322reverse complement
CNT30642274Dioscorea rotundataCannabis sativa63.9639.5387.31323forward
CNT3036965Dioscorea rotundataCucumis melo63.7644.2393.17322reverse complement
CNT30104431Dioscorea rotundataOryza rufipogon34.8527.1694.32176reverse complement
CNT30604015Dioscorea rotundataOryza punctata34.8536.4496.02176reverse complement
CNT30174498Dioscorea rotundataVigna angularis63.9663.9690.4323reverse complement
CNT30551087Dioscorea rotundataOryza brachyantha34.8559.0696.02176reverse complement
CNT30602362Dioscorea rotundataGaldieria sulphuraria16.0429.7883.9581reverse complement
CNT30115272Dioscorea rotundataEutrema salsugineum30.6931.8985.16155reverse complement

Expression of CNT30331560

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAHLAVTLSWIPNTRRSIPGGQRTRRYLGCATGGSGEVGIGEHSSLVGLTT*

>peptide 2 (88 aa)
QLHTSLHFHLTPIVMINGSSRRDLILDSQYSSLHPRRAENPSLSRLCYRRLWGSRNRRALIFGWAYYLDSFSSYLAPHLATQRLPWAQ*

Sequence

>CNT30331560
CTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTAATGATAAATGGCTCATCTCGCCGTGACCTTATCTTGGATTCCCAATACTCGTCGCT
CCATCCCCGGAGGGCAGAGAACCCGTCGCTATCTCGGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTTGGTTGGGCTTAC
TACTTAGATTCTTTCAGTAGTTATCTCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACAATAACTGGTACACCAGAAGGGCATCCTTCCCGGTC
CTCTCGTACTAGGGAAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCAT
CTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCTAGAGACTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGT
GGGGA