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Detailed information on CNT30331546


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730372Dioscorea rotundataCorchorus capsularis62.8313.5492.75262reverse complement
CNT30712870Dioscorea rotundataGlycine max61.3915.493.36256reverse complement
CNT3046714Dioscorea rotundataPrunus dulcis23.546.0189.898forward
CNT30157603Dioscorea rotundataPistacia vera100.2443.8288.52418reverse complement
CNT3092080Dioscorea rotundataSolanum tuberosum62.5944.7793.1261reverse complement
CNT30299883Dioscorea rotundataTriticum aestivum10019.894.72417reverse complement
CNT30221907Dioscorea rotundataHordeum vulgare97.1233.7293.58405reverse complement
CNT30385334Dioscorea rotundataTriticum turgidum10013.9194.96417reverse complement
CNT30543270Dioscorea rotundataBrassica napus10017.4190.89417reverse complement
CNT30147386Dioscorea rotundataMedicago truncatula61.3916.692.97256reverse complement
CNT30435868Dioscorea rotundataAegilops tauschii10029.9194.96417reverse complement
CNT30242786Dioscorea rotundataAvena sativa100.2448.2794.02418reverse complement
CNT30605266Dioscorea rotundataGossypium raimondii62.5912.4793.49261reverse complement
CNT30207637Dioscorea rotundataHelianthus annuus62.5913.3491.95261reverse complement
CNT30688988Dioscorea rotundataTriticum urartu10021.4594.96417reverse complement
CNT30721940Dioscorea rotundataTriticum spelta10036.0194.96417reverse complement
CNT30434643Dioscorea rotundataPapaver somniferum22.312.592.4793reverse complement
CNT3057903Dioscorea rotundataAmborella trichopoda103.1217.9587.44430forward
CNT30108930Dioscorea rotundataOryza longistaminata10017.8294.96417reverse complement
CNT3038420Dioscorea rotundataCucumis melo61.8718.0791.86258reverse complement
CNT30577866Dioscorea rotundataOryza barthii30.947.9294.57129forward
CNT30113381Dioscorea rotundataFicus carica48.4445.2993.07202forward

Expression of CNT30331546

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MGVLFHLFPHGTTSLSVIEEYLGLEGGPPFSRKSDHHSNTPRFTGKDRTMGTNSQGYHLLWPDLPTF

Sequence

>CNT30331546
CTGCTGATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAATCTTCCACCTCTGGAAAGCGCCTATACCTAATGGCTTAAGCTGTTGTTCC
CATTTCCTCGCTGACCCATCATGCGAAAGGTACGCCGTTAGAGTGAGTGCTCCCGCGCTCCGCTCCTTCAACTGATTGTTCGCATCGGATCTCAGGTTCT
CTATTTCACTCCCCGATGGGGGTTCTTTTTCACCTTTTCCCTCACGGTACTACTTCGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCC
CTTTCTCGCGTAAAAGCGATCATCATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACAAATTCACAGGGCTATCACCTTCTTTGGCC
AGATCTTCCAACCTTTT