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Detailed information on CNT30331159


BLAST search results

BLAST vs Swiss-Prot:
sp|P49311|GRP2_SINAL, E-value = 4e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299705Dioscorea rotundataTriticum aestivum12.5822.9887.7257forward
CNT30116148Dioscorea rotundataOryza nivara12.3624.8989.2956forward

Expression of CNT30331159

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLRPSRSWPFILSMVTKPNPLDLPVSRSFIT*

>peptide 2 (28 aa)
MPSERRGTRGTLERSERRERGRRSQPTSL

>peptide 3 (74 aa)
MENHQIREIQTLDSMISPKTLKASSRERSSVAQARPPTKQRNALSMDAIGEERNQRNPREIGEKREGEEIPAHLF

>peptide 4 (82 aa)
TAVPAEPTSTATATAATGLSFVDGDAPAVEILAVHPIDGNETKPSRSPRFPIIYHLKTNPKNPDPLDLAPKPREINGKPSDP*

Sequence

>CNT30331159
CACCGCCGTCCCGGCGGAACCCACCTCCACCGCCACCGCCACCGCTGCCACGGGACTGAGCTTCGTTGACGGTGATGCTCCGGCCGTCGAGATCCTGGCC
GTTCATCCTATCGATGGTAACGAAACCAAACCCTCTCGATCTCCCCGTTTCCCGATCATTTATCACCTGAAAACCAACCCCAAAAACCCAGATCCATTAG
ATCTAGCACCGAAACCAAGAGAAATCAATGGAAAACCATCAGATCCGTGAAATACAAACCTTAGACTCGATGATTTCGCCGAAAACCTTGAAGGCTTCCT
CGAGGGAGCGTTCATCCGTCGCCCAGGCAAGACCGCCAACGAAACAGCGGAACGCGTTGTCCATGGATGCCATCGGAGAGGAGAGGAACCAGAGGAACCC
TAGAGAGATCGGAGAGAAGAGAGAGGGGGAGGAGATCCCAGCCCACCTCTTTG