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Detailed information on CNT30330773


BLAST search results

BLAST vs Swiss-Prot:
sp|P30078|CHSY_MALDO, E-value = 2e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507146Dioscorea rotundataNicotiana attenuata21.511181.2117forward

Expression of CNT30330773

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSINGTFRVRKYSLSSRNHLKQWPFNTSIRISSNDHCRSSITKQSLSD*

Sequence

>CNT30330773
GCACTATTAAGCCTCATAGAGGAAATGGATAAAAACTTATAAATTAATAATATCATCCCAGATGCAACCATGCTGATGCTGATGCTGATGCTGATGAGTA
GTAGAACTTCAACTTAATTAGTGAATGGGCAAACTGTGCAAGACCACAGTCTCCACAGTAAGTCCAGTCACTGATCCCTAAAGGCTCAAAAGCCTCAGCC
AAACTCTTCTCAATGTTCTTAGATATCAACCCTGGCACATCCTTCAAAAGATGAAAAGTTAACCCAACTTCTCTAAGATGTCCATCAATGGCACCTTCAG
AGTCAGGAAGTATAGTTTGAGCAGCAGAAACCATCTCAAACAATGGCCTTTCAATACTAGTATCAGGATCAGCTCCAATGATCATTGCCGCAGCTCCATC
ACCAAACAAAGCTTGTCCGACTAGAGAATCCAAGTGAGTATCAGATGGGCCACGGAAAGTGACTGCTGTGATCTCTGAGCAAACAACAAGAACACGTGCG
CCGCGGTTGTTCTCAGCGAGATCTTTAGCCAAACGGAGAACAGT