Detailed information on CNT30330754


BLAST search results

BLAST vs Swiss-Prot:
sp|P51075|CHSY_BETPN, E-value = 1e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378288Dioscorea rotundataArabidopsis thaliana12.9730.428580forward
CNT30381286Dioscorea rotundataManihot esculenta47.1638.4480.76291forward
CNT30712527Dioscorea rotundataGlycine max22.229.3483.21137forward
CNT30156283Dioscorea rotundataPistacia vera15.8825.4585.7198forward
CNT30646840Dioscorea rotundataRosa chinensis22.697.7381.43140forward
CNT30155426Dioscorea rotundataPrunus persica10.5322.0386.1565forward

Expression of CNT30330754

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSINGTFRVRKYSLSSRNHLKQWPFNTSIRISSNDHCRSSITKQSLSD*

Sequence

>CNT30330754
GCACTATTAAGCCTCATAGAGGAAATGGATAAAAACTTATAAATTAATAATATCATCCCAGATGCAACCATGCTGATGCTGATGCTGATGCTGATGAGTA
GTAGAACTTCAACTTAATTAGTGAATGGGCAAACTGTGCAAGACCACAGTCTCCACAGTAAGTCCAGACCCAACTTCATCTCCACTTGATCAAGAATAGC
AGGTCCACCAGGATGAGCAATCCAAAAGATAGAGTTCCAGTCACTGATCCCTAAAGGCTCAAAAGCCTCAGCCAAACTCTTCTCAATGTTCTTAGATATC
AACCCTGGCACATCCTTCAAAAGATGAAAAGTTAACCCAACTTCTCTAAGATGTCCATCAATGGCACCTTCAGAGTCAGGAAGTATAGTTTGAGCAGCAG
AAACCATCTCAAACAATGGCCTTTCAATACTAGTATCAGGATCAGCTCCAATGATCATTGCCGCAGCTCCATCACCAAACAAAGCTTGTCCGACTAGAGA
ATCCAAGTGAGTATCAGATGGGCCACGGAAAGTGACTGCTGTGATCTCTGAGCAAACAACAAGAACACGTGCGCCGCGGTTGTTCTCAGCGAGATCTTTA
GCCAAACGGAGAACAGT