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Detailed information on CNT30330128


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196701Dioscorea rotundataPisum sativum68.0828.597.13593reverse complement
CNT30213086Dioscorea rotundataHelianthus annuus68.0898.1896.8593forward
CNT3049178Dioscorea rotundataCucumis sativus68.0869.0397.81593reverse complement

Expression of CNT30330128

Peptides detected in this lncRNA

>peptide 1 (57 aa)
ADVAFRTPPAPYEKSKSLVRGEILGFMKDEPLRKHLPRMFSLIKNESWGIEDDQIPS*

>peptide 2 (36 aa)
MPTRDRRMLLLGLRRHLMRNQSLWVPGGVWSRHSKD*

>peptide 3 (47 aa)
MGGGAWPFLVGGAICLVNSDNERDLSLLTSYAEESLRGQLLRGTVAV*

Sequence

>CNT30330128
GGCAGATGTTGCTTTTAGAACTCCACCGGCACCTTATGAGAAATCAAAGTCTTTGGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACCACTGCGA
AAGCATTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGATCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCA
GGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCCAGACATAGCAAGGATTG
ACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACC
TCAGCCTGCTAACTAGCTATGCGGAGGAATCCCTCCGCGGCCAGCTTCTTAGAGGGACTGTGGCCGTTTAGGCCACGGAAGTTTGAGGCAATAACAGGTC
TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTTGTAAAATTT
CATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTG
TACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTCTCGCCGCCCGCGACGTCGCGAGAAGTCC
ACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCA