Detailed information on CNT30329990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Dioscorea rotundataSecale cereale2.7322.0793.6247forward
CNT30587177Dioscorea rotundataMusa acuminata3.8920.4386.5767forward

Expression of CNT30329990

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MQFAHKVASFIYMYSSSLYFVIRGFSFSPLLLCVCVISIHC*

>peptide 2 (31 aa)
MSMHYGNVMIQRYFLINVKIQQASNLKLSHG*

>peptide 3 (31 aa)
MFKILVRFCFSGLHRFADLVRVEPSNAILVR*

>peptide 4 (58 aa)
MFCITHLLASYCWDAVWVFLFQLFLGECPLHLLHMRRLICGCLKSCLICWLFKFFLLG*

>peptide 5 (32 aa)
MGKVMVPMTFLQVMQLLPQACCLPLPKLVWTK*

>peptide 6 (32 aa)
MLFWLDKNRLRMSVDPLMSAWRQNKSLAKSIQ*

>peptide 7 (35 aa)
MLICERNYYCSLFLTKIDGDHFVAYCHLFFFHVAC*

>peptide 8 (29 aa)
YVVDPVSIVHFFSFLFVDLDLWCLVLAYN*

Sequence

>CNT30329990
TTTACGTGGTAGATCCGGTCTCCATCGTCCACTTTTTTAGTTTTTTGTTTGTGGATTTGGATCTCTGGTGCTTGGTTCTCGCCTATAATTAGCGCCTTAG
AGGAGGAGAAGGAGTTGTCAATCTCCATCAATGGAAAGCTTTGTGGCTAGGGTTTGTTGGTTAGGGTTTGGATTCCCGCTTTTTTTTTGTTCCTTTGATG
GGGTTTAAAACCTTTGTTTGATGTTTTTTGATGGAAGGCTGATGAGCTGCTGTAGGGGTTTCAGTTTACGCAGATGGAGGCAGTGAGTTTGAGGCAGCAA
ATGCATAACTTCAAGAATTATAAATGGGCAAAGTGATGGTACCGATGACTTTCTTGCAAGTTATGCAGTTGTTGCCTCAAGCTTGCTGCCTCCCTCTGCC
AAAACTAGTATGGACAAAATAACCCATGTCAATGCATTATGGTAATGTGATGATTCAAAGATATTTTTTGATTAATGTTAAAATCCAGCAAGCTTCAAAT
TTGAAGTTGTCTCATGGTTAAACAATGAGTATTGCTTATGACATTTTTTTTTTAAACTAACAAATTCATTGCAAGGAGGCCCATCATTTACTAGTATGTT
TAAGATCTTAGTGAGATTTTGCTTCAGTGGTCTTCACAGATTTGCTGATCTGGTCAGAGTCGAACCTTCTAATGCTATTCTGGTTAGATAAAAATCGGTT
GAGAATGTCTGTAGACCCTCTCATGTCAGCTTGGAGGCAAAACAAATCTTTGGCCAAAAGCATTCAGTAATGTTCTGCATAACACATTTGCTAGCATCAT
ATTGTTGGGACGCAGTGTGGGTATTCCTCTTTCAACTATTTCTTGGAGAATGCCCACTACATCTCCTTCACATGAGACGGCTGATTTGCGGATGTCTTAA
ATCCTGCCTAATATGCTGGTTGTTTAAATTTTTTCTGCTGGGATAGACTTTTCACAAGCTACCTGCAAGATCTTCTGTGTCACAATCTACATTGTTCAAG
GCGGCGATCTTACTTAACAACTCTACATCTCATAAGGTTGTGATTTGATTACTCTTTATTCTTCCATATGCAATTTGCCCACAAAGTGGCATCTTTCATT
TACATGTACTCAAGCTCATTGTACTTTGTGATTAGAGGGTTTTCTTTTTCCCCTCTTCTTTTGTGTGTGTGTGTTATTAGTATTCATTGTTAAAGGAGCA
GTGTTAGTCAATTACTTTTGATCCCATATGTTAGTGCTGCTGGTTATTTTTCTTCTTCCCTATGCTGATTTGTGAAAGAAATTATTATTGCTCCCTCTTC
TTGACCAAAATTGACGGAGACCATTTTGTCGCATATTGCCATCTGTTCTTTTTTCATGTAGCTTGCTAACTATTCAGCCGTTAGCTTATATCCCCAATGG
CTTTCATATTCCTCTTTGGGACTGGAGCTTTTGTTTTGTTTTTGTTGGTCCTTTTGCCGTAGAATTCCATAACGTTCAGTATCATTGATTGTCTTCCATT
TGAGCTTACACATTTCACAAGCTTTCTGTCACTATCAGATCCATTTAATATTAAAGATCACAGAATTCCCATGATCCGTCTAGGCTTCCTTTTAGTCTAA
GCAATTTTAGTATTGAAGTCTCTTGTTATGGCTCAAGGAAAAAAAAATTCATCAGGACTTAATGGATTTCATGTCTTTCCGCAATTCTGATCTCAGATTT
TCATTACTGACCGCGTGACCAC