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Detailed information on CNT30329127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30115987Dioscorea rotundataOryza nivara11.1421.0591.6748forward

Expression of CNT30329127

Peptides detected in this lncRNA

>peptide 1 (83 aa)
ASIAQRQWYTSDSLNLSRFSGAEPSRCGGRGCPGNHSADMEKRDVAFAPAPAGRATEVANWDFEDERRVGNTAQQLLSELEAI*

>peptide 2 (28 aa)
MGGCPVKRWLQASFDEMKSACRFLLVGIC

>peptide 3 (38 aa)
SKHSPAAVVHLRLFEPFQVFRGGAIKVWWARLPWKPLS*

Sequence

>CNT30329127
CAGCAAGCATAGCCCAGCGGCAGTGGTACACCTCCGACTCTTTGAACCTTTCCAGGTTTTCAGGGGCGGAGCCATCAAGGTGTGGTGGGCGAGGCTGCCC
TGGAAACCACTCAGCTGACATGGAGAAGCGGGACGTAGCATTTGCGCCGGCACCAGCTGGGAGGGCGACTGAGGTGGCGAACTGGGATTTTGAAGACGAG
AGGAGGGTCGGAAACACCGCACAGCAGCTCCTCAGTGAACTGGAAGCCATTTGATACCACCCTTACAGAGTCCGGTCTGATCTTCTAGTGTGTTTGGGAG
ATTGTGTCTCTGTGCTGTGGTGGTAGAGCCGTAGAAGAAGGCAGATGGGTGGATGCCCCGTTAAAAGATGGCTGCAAGCCAGTTTTGATGAGATGAAATC
TGCATGTCGATTCCTATTGGTTGGTATCTGC