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Detailed information on CNT30328854


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374334Asparagus officinalisArabidopsis thaliana33.144.0990.71280forward
CNT30501326Asparagus officinalisCoffea canephora62.725.0186.04530forward
CNT30307873Asparagus officinalisTriticum aestivum42.7285.7584.49361reverse complement
CNT30713027Asparagus officinalisMalus domestica golden46.2711.0888.75391forward
CNT30688804Asparagus officinalisTriticum urartu86.8619.8287.47734forward
CNT3036187Asparagus officinalisCucumis melo24.6223.0190.38208reverse complement
CNT30102192Asparagus officinalisOryza rufipogon102.9637.9987.01870forward

Expression of CNT30328854

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MCGSVVRPEMLCLHTRLPLFPKASRGRLFTTLRRRRTARRGFTAQGPCRGKALSQRIEDAQ

Sequence

>CNT30328854
GCTGCGTGAGCAACCCGACTGATGGCCTTTACGCAACTACGACTACTGTGATGTGAGCGGTTCCAATTGGTTTGATCTTTCGCGCGGAACTTGTACAGAG
ATGCATGCATAAAGGGACCCGCCCCTTTTTTGATCTTCATCTTTAGGACCCTACCCTATTCTCGAACCCTCTGCCGAGCTCTACCCTGCCTGCATTTCTT
TTGAAGGGGGCCACCTGCTGCCCAACAGTCTTTCTTCGGAATTCTACCGTAACGGCTTTCTCAGCGCCTCCGTTTGTTTTAGCAACTTTATCCTACGGTC
TCCTCGCCAAGAGCTCCCCGGCGACGACAGAGGCGATGGAATCCCTGCCTGCTGTGGCGGCGCGCTTTTTTGTTGAACAATAAGACCTGGACGATTATCC
CTACCCTCGGTAGCTTACGAGTTTACGTCCATCCCTGGTCGGTACAGTTTCCTTTCTTGCCTGCGCCCTTGTAGCCGTTACCCGAATTCGCGGCAGTGTG
TCACACCCCCCTGATTGACGAGGAATCCATTCTCGCGAACAAACACACCCCCTACACACACCTAGGAGCGCCCCTTCCTGCATATCCATACAAGACCGCG
AGTAGGCGGGTCGAGGTCCTACGGGTACCCACTACTCGGAGTACCCTCCCACCAAAAAAAGATGTGTGGTTCGGTGGTTCGACCAGAAATGCTATGCTTA
CACACAAGACTACCCCTCTTCCCGAAAGCTTCGCGGGGACGACTCTTTACTACTTTACGACGACGGAGGACCGCCCGTAGGGGGTTTACTGCACAAGGCC
CCTGCAGAGGAAAAGCTTTATCCCAGCGAATAGAAGATGCTCAGC