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Detailed information on CNT30328555


BLAST search results

BLAST vs Swiss-Prot:
sp|S5ZH89|PIP11_MUSAC, E-value = 3e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30145769Asparagus officinalisMedicago truncatula22.8521.1590.9177forward
CNT30609232Asparagus officinalisGossypium raimondii21.3613.5686.1172forward
CNT30712987Asparagus officinalisMalus domestica golden20.4719.3385.5169forward
CNT30423559Asparagus officinalisPapaver somniferum20.1814.4488.2468forward
CNT30334008Asparagus officinalisCynara cardunculus22.8534.2288.3177reverse complement

Expression of CNT30328555

Peptides detected in this lncRNA

>peptide 1 (34 aa)
NQRFRQCSRQEQRSCLQRPKQSLECPQWSTLKGT*

>peptide 2 (30 aa)
TRDSGSAVDKSKDHASKGPSNPLNAHSGAL*

Sequence

>CNT30328555
TAACCAGAGATTCCGGCAGTGCAGTAGACAAGAGCAAAGATCATGCCTCCAAAGGCCCAAGCAATCCCTTGAATGCCCACAGTGGAGCACTTTGAAGGGG
ACTTAACAACCCCCATAACAGTCAATACGGAGATATAAAGAAACAAGAAGGTCCCAATTGGCTGCCTCTCCGAGAACTTGTTTGCTCCTAGCTTAACATC
CTCCTCTTTGCCTTCCATTTCTTGTTATTATTATTAGAATTGTAAGCTCTTGAAGGAGATTATAGCAGTATGAAGTGGGGAGAAAGAGAAAGAGGGCGAG
GGGCTTTTATAGAGGTGTTGAAGACAAAAGAAATTGT