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Detailed information on CNT30328300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631438Asparagus officinalisVigna unguiculata20.819.3787.162forward
CNT30709232Asparagus officinalisGlycine max5019.9783.22149forward
CNT30300179Asparagus officinalisTriticum aestivum46.981280.71140forward
CNT30393350Asparagus officinalisTriticum turgidum46.9813.9981.43140forward
CNT30144776Asparagus officinalisMedicago truncatula42.959.7585.16128forward
CNT3062430Asparagus officinalisArabidopsis lyrata49.3312.7580.95147forward
CNT303614Asparagus officinalisZea mays41.2821.5883.74123forward
CNT30685178Asparagus officinalisTriticum urartu46.9817.2481.43140forward
CNT3053264Asparagus officinalisAmborella trichopoda90.9443.2980.07271forward
CNT30150466Asparagus officinalisBrachypodium distachyon31.8828.0282.1195forward
CNT30558331Asparagus officinalisPanicum hallii33.2211.9684.8599forward

Expression of CNT30328300

Peptides detected in this lncRNA

>peptide 1 (51 aa)
GSRTLAGNIVLVPLLLSSLYGCSFRPSRRSQDQNRFFGRLSRSRCFRRLRI*

>peptide 2 (44 aa)
MLKTSGWAFSISSKRTTVYGRRRTASVNCPPSVYPTYPGGEPISL

Sequence

>CNT30328300
GGTTCAAGAACTCTGGCCGGAAATATTGTTTTAGTTCCTCTGTTACTAAGCTCTTTATACGGTTGTAGCTTCCGTCCTTCTCGTCGTAGTCAAGATCAAA
ACCGATTCTTCGGCCGCCTTTCTCGATCACGCTGCTTCCGACGTTTGAGGATCTGAAGCATCATGTTGAAAACGTCCGGGTGGGCTTTCTCGATCTCGTC
GAAGAGAACGACGGTGTACGGCCGACGACGGACGGCCTCAGTTAACTGTCCACCTTCAGTGTATCCAACATATCCGGGCGGTGAACCTATTAGTTTAG