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Detailed information on CNT30328090


BLAST search results

BLAST vs Swiss-Prot:
sp|P18026|TBB2_MAIZE, E-value = 5e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641079Asparagus officinalisNymphaea colorata70.4132.0386.13238forward
CNT30516889Asparagus officinalisJuglans regia73.6741.1682.73249forward
CNT30617295Asparagus officinalisSesamum indicum47.0438.7883.65159forward
CNT30562825Asparagus officinalisActinidia chinensis94.6757.9785320forward
CNT30511058Asparagus officinalisSolanum lycopersicum40.2456.985.29136forward
CNT30442409Asparagus officinalisAegilops tauschii79.294085.82268forward
CNT30253208Asparagus officinalisAvena sativa90.8325.5485.99307forward
CNT30722476Asparagus officinalisTriticum spelta91.7246.3485.48310forward
CNT30706519Asparagus officinalisPrunus avium97.6339.8183.64330forward
CNT3057379Asparagus officinalisAmborella trichopoda44.3853.7686.67150forward
CNT30149545Asparagus officinalisBrachypodium distachyon25.4425.684.8886forward
CNT30117026Asparagus officinalisOryza nivara69.8235.1285.17236forward

Expression of CNT30328090

Peptides detected in this lncRNA

>peptide 1 (55 aa)
WTLIICSSTSLVLILPRNMAEAVRYRPCLGSAAHIMFLESHICWVSSGTVRERYC*

>peptide 2 (44 aa)
MKKWRRGKGIRFTASLRRSEFSCPGKRRQHVTPLMVAEIKWLRSP

>peptide 3 (77 aa)
LDVDHLLVYFFGAHLATEHGGGCEISPMPWVSSAHHVLGVPHLLGELGDGKGTVLLRPTGGEGGKANHEEVEAREGD*

Sequence

>CNT30328090
TCTGGACGTTGATCATCTGCTCGTCTACTTCTTTGGTGCTCATCTTGCCACGGAACATGGCGGAGGCTGTGAGATATCGCCCATGCCTTGGGTCAGCAGC
GCACATCATGTTCTTGGAGTCCCACATTTGCTGGGTGAGCTCGGGGACGGTAAGGGAACGGTACTGCTGAGACCCACGGGAGGTGAGGGGGGCAAAGCCA
ACCATGAAGAAGTGGAGGCGAGGGAAGGGGATTAGGTTTACTGCGAGCTTGCGGAGGTCAGAGTTCAGTTGCCCAGGGAAGCGGAGGCAACATGTAACTC
CACTCATGGTGGCCGAGATCAAGTGGTTGAGATCACCA