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Detailed information on CNT3032754


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532219Theobroma cacaoEucalyptus grandis85.0666.3582.621116forward
CNT30701438Theobroma cacaoQuercus lobata81.3373.1383.791067forward
CNT30500417Theobroma cacaoCoffea canephora85.0655.4181.451116forward
CNT30615929Theobroma cacaoSesamum indicum84.7633.2481.291112forward
CNT30279009Theobroma cacaoChenopodium quinoa84.372.3883.181106forward
CNT3020365Theobroma cacaoCitrullus lanatus68.651.5582.33900forward
CNT3069548Theobroma cacaoQuercus suber45.0583.2485.45591forward
CNT30379426Theobroma cacaoManihot esculenta68.1477.283.45894forward
CNT30525173Theobroma cacaoPhaseolus vulgaris84.653.4284.51110forward
CNT30629001Theobroma cacaoVigna unguiculata79.0484.7282.641037forward
CNT30637458Theobroma cacaoCapsicum annuum84.5325.2681.611109forward
CNT30568725Theobroma cacaoActinidia chinensis84.0795.0980.61103forward
CNT30538027Theobroma cacaoBrassica napus87.0460.2381.171142forward
CNT3061767Theobroma cacaoArabidopsis lyrata67.6154.3282.75887forward
CNT30460578Theobroma cacaoSaccharum spontaneum81.4853.4281.381069forward
CNT30624553Theobroma cacaoDaucus carota84.9181.6783.031114forward
CNT30480747Theobroma cacaoArabidopsis halleri66.9275.6983.14878forward
CNT30429148Theobroma cacaoPapaver somniferum84.0782.2582.051103forward
CNT30642981Theobroma cacaoCannabis sativa63.9574.7882.48839forward
CNT3024139Theobroma cacaoPopulus trichocarpa66.6981.4783.31875forward
CNT30324534Theobroma cacaoAsparagus officinalis79.1281.1681.71038forward

Expression of CNT3032754

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVLPVRVFTKICIPPRRRSTKWRVDSFWIL*

>peptide 2 (40 aa)
MVSELSTSKVMVFPVRVFTNICMPPLSRRTRWRVDSFWIL*

>peptide 3 (30 aa)
HHTASKPLNQNSILKGVLKLFEPFATDWQN*

>peptide 4 (37 aa)
MVSELSTSKVIVFPVRVFTKICMPPRSRNTKWRVDSF*

>peptide 5 (49 aa)
APHSIKTIKPEQYFKRSFETIRAFCHRLAKLEHKYNLETTTESQHQMEG*

>peptide 6 (40 aa)
MVSELSTSKVMVFPVRVFTNICMPPLRRRTRWRVDSFWIL*

Sequence

>CNT3032754
GCACCACACAGCATCAAAACCATTAAACCAGAACAGTATTTTAAAAGGAGTTTTGAAACTATTCGAGCCTTTTGCCACAGATTGGCAAAATTAGAACACA
AGTACAACTTAGAAACCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTT
TTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAA
AGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATGCCACCCCTAAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCA
GCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGAATCTTAGCTTTGACATTAT
CAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAAATCTGCATTCCACCACGCAGACGCAGCACCAAGTGGAG
GGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCC
TTGTCCTGGATTTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCATGC
CACCACGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAA
CCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTTTTCCCA
GTGAGAGTTTTCACAAATATCTGCATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCAT
CCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCT
TTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATCTGTTAAAGAGATTTGAAAATCGAGATCGGGAGCTTTTCAATCGAT
GATTGAGAGAAA