Detailed information on CNT30327337


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534974Asparagus officinalisEucalyptus grandis8.2228.492.7569reverse complement

Expression of CNT30327337

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGTKRAVYIRPYAHPYSQNQNTKPDGLLISFGR*

>peptide 2 (57 aa)
MADQLTEDQISEFKEAFSLFDKDGDAKEEAAHQHQFILHAALDIVQDLAWTTSAIEP*

>peptide 3 (58 aa)
MDNKCHRTLNLFNKWHRRILTRKQALLLKLLLLLLLLLKLLKLLLPKQLLLLLLLLKL*

>peptide 4 (72 aa)
MPTRIPKTKTRSLTVFSFLSVADDKFSTSLLFFDLSFVRSIDLSTLNGGSADGRSDLGVQGGLQLVRQGWRR*

>peptide 5 (49 aa)
MFILFPCVVIIVSRSIVNLGAKIYFLVKSLPFDLCFLVFSFFCHDPVHV*

>peptide 6 (51 aa)
MAQTNSDEKASAAAEAVVVVAAAAEVAEAAAAEAVVVAAAAAEAVILVDFG*

Sequence

>CNT30327337
GGAAGGCAATTTGTGCCCATGCCCATTTACCCACCTAGCCCGCCCATCAATTGGCCCGCCCAAAACCCACCCATTTAGTTAAATGGGTCTAATTGGGCGG
GTTCATTTCAAACTATTCTAAATGGGTACTAAACGGGCGGTCTATATTCGCCCATATGCCCACCCGTATTCCCAAAACCAAAACACGAAGCCTGACGGTC
TTCTCATTTCTTTCGGTCGCTGACGATAAGTTTTCGACTTCTCTTCTCTTTTTCGATCTCTCTTTCGTTCGATCAATCGATCTCAGTACTCTCAATGGCG
GATCAGCTGACGGAAGATCAGATCTCGGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGATGGAGACGCTAAAGAAGAAGCAGCTCATCAGCACCAAT
TTATTTTGCATGCTGCTTTAGATATTGTTCAGGACCTTGCATGGACAACAAGTGCCATAGAACCTTGAATTTGTTCAATAAATGGCACAGACGAATTCTG
ACGAGAAAGCAAGCGCTGCTGCTGAAGCTGTTGTTGTTGTTGCTGCTGCTGCTGAAGTTGCTGAAGCTGCTGCTGCCGAAGCAGTTGTTGTTGCTGCTGC
TGCTGCTGAAGCTGTGATTTTGGTTGATTTTGGTTGATTCTGTAATATGTTTATACTGTTTCCTTGCGTTGTGATTATTGTCAGTCGCAGCATTGTCAAT
TTGGGGGCTAAGATTTACTTTCTCGTAAAATCCCTCCCTTTTGATCTTTGTTTCCTGGTCTTTTCTTTCTTCTGTCATGATCCTGTTCATGTCTGAACAT
TTGAAAGATGGGAAATAAGTAGACTATGGTTGTGCTACT