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Detailed information on CNT30327286

BLAST search results

BLAST vs Swiss-Prot:
sp|O22582|H2B_GOSHI, E-value = 2e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30693619	Asparagus officinalis	Oryza sativa	22.79	32.54	90.29	206	forward
CNT30675682	Asparagus officinalis	Setaria viridis	22.79	45.47	88.83	206	forward
CNT30523142	Asparagus officinalis	Setaria italica	26.88	46.73	89.3	243	forward
CNT30315505	Asparagus officinalis	Corylus avellana	19.25	38.07	89.66	174	forward
CNT30518328	Asparagus officinalis	Juglans regia	30.86	53.86	87.46	279	forward
CNT30702570	Asparagus officinalis	Quercus lobata	15.38	27.8	91.37	139	forward
CNT30618877	Asparagus officinalis	Sesamum indicum	30.86	35.45	84.95	279	forward
CNT3072234	Asparagus officinalis	Quercus suber	16.81	24.13	85.53	152	forward
CNT30379403	Asparagus officinalis	Manihot esculenta	13.83	22.24	88.8	125	forward
CNT30526697	Asparagus officinalis	Phaseolus vulgaris	19.25	66.16	86.78	174	forward
CNT30630598	Asparagus officinalis	Vigna unguiculata	31.86	51.71	83.33	288	forward
CNT30196132	Asparagus officinalis	Pisum sativum	13.16	25.11	89.92	119	forward
CNT30163367	Asparagus officinalis	Pistacia vera	29.09	31.57	79.85	263	forward
CNT30181099	Asparagus officinalis	Secale cereale	31.31	35.02	90.46	283	forward
CNT30301816	Asparagus officinalis	Triticum aestivum	30.31	39.42	92.34	274	forward
CNT30220727	Asparagus officinalis	Hordeum vulgare	31.31	36.28	91.17	283	forward
CNT30395424	Asparagus officinalis	Triticum turgidum	30.31	56.96	90.51	274	forward
CNT30565715	Asparagus officinalis	Actinidia chinensis	30.86	35.54	87.46	279	forward
CNT30586986	Asparagus officinalis	Musa acuminata	28.98	74.01	92.37	262	forward
CNT3086649	Asparagus officinalis	Vigna radiata	31.86	38.61	86.11	288	forward
CNT30552027	Asparagus officinalis	Oryza glaberrima	30.31	50.83	90.15	274	forward
CNT30171046	Asparagus officinalis	Trifolium pratense	30.86	78.59	81.72	279	forward
CNT30443203	Asparagus officinalis	Aegilops tauschii	30.31	41.77	91.61	274	forward
CNT30241394	Asparagus officinalis	Avena sativa	30.31	52.19	90.88	274	forward
CNT30666604	Asparagus officinalis	Triticum dicoccoides	31.53	54.08	90.53	285	forward
CNT30597299	Asparagus officinalis	Fraxinus excelsior	21.57	35.52	83.08	195	forward
CNT30457276	Asparagus officinalis	Saccharum spontaneum	29.54	25.05	92.88	267	forward
CNT30130711	Asparagus officinalis	Lolium perenne	30.31	40.29	90.88	274	forward
CNT303693	Asparagus officinalis	Zea mays	13.94	36.52	92.86	126	forward
CNT30606042	Asparagus officinalis	Gossypium raimondii	15.27	45.25	89.13	138	forward
CNT3066775	Asparagus officinalis	Leersia perrieri	13.94	32.81	98.41	126	forward
CNT30205622	Asparagus officinalis	Helianthus annuus	10.73	35.93	86.6	97	forward
CNT30129800	Asparagus officinalis	Corymbia citriodora	31.08	34.91	92.17	281	forward
CNT30684130	Asparagus officinalis	Triticum urartu	30.31	37.79	91.97	274	forward
CNT30722585	Asparagus officinalis	Triticum spelta	30.31	37.38	91.61	274	forward
CNT30346527	Asparagus officinalis	Eragrostis tef	19.58	83.89	89.27	177	forward
CNT30363575	Asparagus officinalis	Sorghum bicolor	29.54	28.96	91.01	267	forward
CNT30596761	Asparagus officinalis	Oryza meridionalis	22.79	26.08	85.44	206	forward
CNT30360466	Asparagus officinalis	Lactuca sativa	12.83	27.55	88.79	116	forward
CNT30369169	Asparagus officinalis	Oryza glumipatula	30.2	47.64	89.74	273	forward
CNT30570929	Asparagus officinalis	Vitis vinifera	28.54	38.45	84.5	258	forward
CNT3024772	Asparagus officinalis	Populus trichocarpa	21.57	32.88	82.05	195	forward
CNT30149313	Asparagus officinalis	Brachypodium distachyon	14.05	36.39	85.04	127	forward
CNT30576366	Asparagus officinalis	Oryza barthii	13.94	24.05	99.21	126	forward
CNT30496069	Asparagus officinalis	Digitaria exilis	30.31	34.34	90.15	274	forward
CNT30174435	Asparagus officinalis	Vigna angularis	19.25	25.97	86.78	174	forward
CNT30557628	Asparagus officinalis	Panicum hallii	19.14	31.06	87.28	173	forward
CNT3065708	Asparagus officinalis	Selaginella moellendorffii	13.94	36.31	88.1	126	forward

Expression of CNT30327286

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLMKEFMMPIALLEIPMSGWTCFRTLKM*

>peptide 2 (34 aa)
QILLIFNINIKMVKSKDEEESDAQDVSISYKLLG*

>peptide 3 (57 aa)
MRKTPRPALGLGAGELGDGLGALGDGVLGELAGEDEADGGLDLAGGNGGLLVVAGQA*

Sequence

>CNT30327286
CAAATCTTACTAATATTCAACATCAATATCAAAATGGTTAAATCTAAAGATGAAGAAGAAAGTGATGCTCAAGATGTGAGCATCTCTTACAAGCTTCTTG
GATGAAGAACAGTCTCCAATCGCCACATCAAGAGGCAATTCTTCATCCAATCGACCAGAGATTCTAGCAAACGAATAACCTCAAAAAACTGAGAACTCAA
CAAAATACAACGGAAATGTTGCTTTCAAACATCACAATCACATTAGCACGAATTAGATTCTTCTAAAGACTGGACCATCCAGAGAGAAACAAGAGAGGAG
AAAAAGATGAGAGCAATTACAGGCCAGCGCTGAAGAGATGTAAGTAGAGGCCGTAACCAATTAGTCTACAAACAGAAACATCTAATTAGCCACGTCCTTC
GATTTTGAACAATAACCAACACAATAAATTACTTCTAATCCACAGAAATCACTCACTAATCAAATATCGAAGGAAAAAAGTGCGCTTTTTTTTTGATCCA
CGGCATAAAAGGAAGTAATTACACTAGAGATAACAACTAAACAGCGACAAAAAAACAAGAAAAAAATACTACTCGAATGAGGAAAACCCCTAGACCCGCG
CTAGGCCTAGGAGCTGGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGG
ATCTCGCGGGAGGTAATGGTGGGCTTCTTGTTGTAGCGGGCCAGGCGTGAGGCCTCCTGGGCCAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGA
TGCCCATCGCCTTGCTGGAGATCCCGATGTCGGGGTGGACCTGCTTCAGGACCTTGAAGATGTAGATCTTGTACGTCTCCACGCTCTTCGCCTTCCTCTT
CNNN