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Detailed information on CNT30326905


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Asparagus officinalisOryza sativa18.2220.0597.580forward
CNT30677986Asparagus officinalisSetaria viridis15.2621.4195.5267forward
CNT30506884Asparagus officinalisNicotiana attenuata17.3130.5293.4276forward
CNT30224947Asparagus officinalisHordeum vulgare17.7726.5397.4478forward
CNT30395161Asparagus officinalisTriticum turgidum17.7721.9197.4478forward
CNT30137004Asparagus officinalisLolium perenne17.7733.3394.8778forward
CNT30219096Asparagus officinalisKalanchoe fedtschenkoi17.7722.2293.5978forward
CNT30652446Asparagus officinalisRosa chinensis17.5424.9296.177forward
CNT30207452Asparagus officinalisHelianthus annuus14.1222.2295.1662forward
CNT30721855Asparagus officinalisTriticum spelta17.7720.5397.4478forward

Expression of CNT30326905

Peptides detected in this lncRNA

>peptide 1 (31 aa)
CILSESRVSFWIVRNPSSINARMHLSTFHQS*

Sequence

>CNT30326905
CTTGTATCCTCTCTGAATCTAGGGTTTCATTCTGGATTGTTCGAAACCCTAGCTCTATAAATGCCCGAATGCATCTCTCGACTTTTCATCAGTCCTAATT
CGTAGCCGCTGTTCAGGAGAAGATAAGAAATCATGAGGGCCAAGTGGAAGAAGAAGAGGATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAG
ATCTAAGTAGTCTTCTCATAGCTTTGGCTGCTGCTGTTGCTGGAGCTTTTACTCTTGTGATTGTTTTCTTAGGAGCTGGTTCATTCAGTCAAATCTTCTG
TAATTTTTGCCATTGAACAGTCCTTTTTATGGGAGGAAAATGTTAATTAGTTGACAAAATTTATCATATTTTGCTAAATCTCTCTCCTTTCATTTTTCTT
CCTCGAGTTTTGATTTAAGAACAATTTTTCAAAACAGAC