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Detailed information on CNT30326712


BLAST search results

BLAST vs Swiss-Prot:
sp|O22319|MT2_MUSAC, E-value = 4e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Asparagus officinalisQuercus suber8.5928.0985.3375forward
CNT30222406Asparagus officinalisHordeum vulgare8.8220.9884.4277reverse complement
CNT30661738Asparagus officinalisTriticum dicoccoides8.8226.6484.4277reverse complement
CNT3036674Asparagus officinalisCucumis melo6.7621.5388.1459reverse complement

Expression of CNT30326712

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RYSGIIQGGAGGGEDADASRRRLRRLIIA*

>peptide 2 (41 aa)
MQVWIQLHLRPLQLQMKLGTTRYIYKRNKLLECGVLMTWKS*

>peptide 3 (77 aa)
MSCCGGNCGCGSGCKCGNGCGGCNMYADFGEGRSAAVTVVTGVAPQKGGFEGVEAAEGAENGCKCGSNCTCDPCNCK*

Sequence

>CNT30326712
AGATATTCGGGGATAATCCAAGGGGGGGCGGGGGGTGGTGAGGATGCCGATGCTAGTCGTCGAAGACTCAGGAGGCTGATAATTGCGTAGGCGTAACAGC
AACCAATATTATATTATTCCCTGTATTTTCAACCCATAAGATCTCAACACGTGTACGGCTCATATCAACCCTCTTCCCTCCCTACCTCTATAAATTTAGT
TCAAATCCTCAACCTCTCTTAATTAACACGGAGTCTTATAAACTTACAGAAAGAATCATTTGATTTAAAAGAGTTTATTTCTCCAAGATTTCTGTTTGCA
AAAAAAAAAAAAAATGTCTTGCTGTGGTGGTAACTGCGGGTGCGGCTCTGGCTGCAAGTGTGGCAACGGCTGTGGAGGATGCAACATGTACGCTGATTTC
GGCGAGGGAAGGAGCGCCGCTGTGACCGTGGTCACCGGTGTCGCACCTCAGAAGGGGGGGTTTGAGGGTGTGGAGGCGGCTGAGGGAGCTGAAAATGGAT
GCAAGTGTGGATCCAACTGCACTTGCGACCCCTGCAACTGCAAATGAAACTAGGGACAACAAGATACATATATAAAAGAAATAAATTACTCGAGTGTGGT
GTGCTGATGACGTGGAAATCTTAATGATGTATAAATAAGAGGCCATGGCTACTCTCTTTGAGGGTTTTCCTGGTTTTGTGTTTGTCAATCTTCGCTGGAT
TTGAATGTAAAATTCGGTTTCCATTTTAAGTAATTATATTGTATTATATTTGCGTGTAAATTGGCTGGTTGTGCTTCTGTGTTGCTTGGTTTTCATTATG
TTGAAATATGAGGAGTTCGACCACGATGCATAATATTTACATAAAAGTAATAACAAAATGTATAATATTGTAG