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Detailed information on CNT30326571


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3024855Asparagus officinalisPopulus trichocarpa49.6751.6279.87303forward

Expression of CNT30326571

Peptides detected in this lncRNA

>peptide 1 (48 aa)
QIPFKFFPIETRINILNHKQENSTSTNNKAKKTLKIPSFFFLTARLLG*

>peptide 2 (38 aa)
MPWMLSRRTLRWRFAPPLPSPFPPFPRPDIGERENRKR*

Sequence

>CNT30326571
ACCAAATTCCATTCAAATTCTTCCCAATTGAAACACGTATTAACATTCTAAATCACAAACAAGAAAACAGCACCAGCACGAACAACAAAGCTAAAAAAAC
CCTAAAAATCCCATCTTTTTTTTTCTTGACAGCAAGACTTTTGGGGTGAGCGGAACAAAGAAACCCTAACCCTAACCGCCGAACCCATAAAGAGTCCTGC
CCTGCCTCTTGAGCGCGTACACCACATCCATCGCCCTAACCGCCGAACCCATAAAGAGTCCTGCCCTGCCTCTTGAGCGCGTACACCACATCCATCGCCG
TCACCGTCTTCCTCCTCGCGTGCTCGGTGTAGGTCACCGCATCCCTGATCACGTTCTCGAGGAATATTTTCAGGACCCCCCTCGTCTCCTCGTAGATCAG
CCCGCTGATCCTCTTCACCCCGCCCCTCCTCGCGAGGCGGCGGATCGCCGGCTTCGTGATGCCCTGGATGTTGTCGCGGAGGACCTTGCGGTGGCGCTTC
GCCCCGCCCTTGCCGAGCCCCTTCCCGCCCTTTCCTCGGCCTGACATCGGTGAGCGAGAGAACAGAAAAAGGTAGAGTCTTTTTTTGGGGTGAGGAGAAA
GAGGGGTCTG