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Detailed information on CNT30326410


BLAST search results

BLAST vs Swiss-Prot:
sp|P62981|RS27A_SOLTU, E-value = 1e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Asparagus officinalisCorylus avellana18.8571.7589.82226forward
CNT30518728Asparagus officinalisJuglans regia18.7738.4690.22225forward
CNT30728895Asparagus officinalisCorchorus capsularis19.2731.8689.61231forward
CNT30220676Asparagus officinalisHordeum vulgare20.142.8191.29241forward
CNT30623440Asparagus officinalisDaucus carota20.0212.0691.25240forward
CNT30720110Asparagus officinalisTriticum spelta20.1838.2990.91242forward
CNT30580715Asparagus officinalisEchinochloa crusgalli18.645.8890.13223forward

Expression of CNT30326410

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MRRCWSGGIPSLSWILALTLSIVSEDSTSRVMVLPVRVLTKICMLAAVLRGSGGGGRRRGRR*

>peptide 2 (32 aa)
MYHCTMIESRSQEVIIHQPFTINNQAKQIKTT*

>peptide 3 (41 aa)
GLGNANPILACNITKKQQRCSNLQTYISQIGIHSVVCRQQK*

Sequence

>CNT30326410
ATGGACTAGGGAATGCTAATCCTATCCTAGCGTGCAATATCACTAAAAAGCAACAAAGATGCTCTAATCTTCAAACATACATTTCACAAATCGGCATTCA
TAGTGTGGTTTGTAGACAGCAGAAATAACGCCAAAATAAACAGAAAAAGTGCAGAGCACACCAGTAACATGCCAAATTTCCCAACATCTACGGCCGAAAA
AAGTTTCTAACTTAAGCTAAGATGTATCACTGCACGATGATTGAATCAAGATCCCAAGAAGTAATAATACATCAGCCCTTCACAATTAATAATCAAGCTA
AACAAATCAAAACAACATGACACCAATCCTCATATGTGAACACAGTAACAACAGTAGTAACCAATAACCAAGCATCATCATACCGCAGTAAATAGACAAA
ACTAACAGAAAATTGTAACTTTTTAAACCACAATCCAGCGATAACTAATTATCTTCATAGATCCAACAACTAGAAACCGAAACCAAACATCATAAACCAA
ACTAAAATTACCAGACCCAAAACAAACCCTAACACAAAAAAACACCAAAGGTCTCAACTTTCCAACTCAAACCGATCAAAGATCAAATTTTTACTCACCT
TTCTGGTACACGTAGGTGAGCCCGCACTTCCCACAGTAGTGACGGTCCTTGTGGTTCGCCATGAAAGTCCCGGCTCCGCACTCAGCATTGGGGCACTCCT
TCCTCAGCCTAATCACCTTCCCGGTGTCGTCAACCTTGTAGAACTGCAGGACAGCGAGCTTCACCTTCTTCTTCTTGTGCTTGATCTTCTTGGGCTTCGT
GTACGTCTTCTTCTTCCTCTTCTTCGCGCCTCCGCGGAGGCGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCG
TCCTCGAGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGG
ACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCATGTTGGCTGCGGTTTTGAGGGGCTCCGGCGGCGGAGGGCGCCGGCG
GGGGAGGCGATGATTAGGGTTTTGAGGGAGGATTTCAGGGGGAGGCGAGTTTTCTAGGGTTAGGGCTTGGGGTGAGGAATGAGGAACGGTATTTATAGG