Detailed information on CNT30326285


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30493672Asparagus officinalisOlea europaea7.4826.3984100reverse complement

Expression of CNT30326285

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MGSEGPSAITVHVTGFKKFHGVTENPTEKIVSNLKXXXXXSWELQCS*

>peptide 2 (66 aa)
MGYPVMPSDDAGRFVCNYVYYHSLRFAEHNGNRSLFVHVPLFMTIDEESQMEFVASLLEVLASLRY*

>peptide 3 (49 aa)
MRSPRWSSLLLFSRFWLLCVISIVRRCSEAALCFQERMCCCVLTTVIWV*

>peptide 4 (34 aa)
MMLVALCAIMCTIILFGSQSIMVTDLSLYMFLSL*

>peptide 5 (43 aa)
MEATESSGLPFRRRYFTSTRDFSSRGRDNEVVDKHGIPRDAFR*

Sequence

>CNT30326285
GGGTGTTCTTGAAAACCTTGAGATTTCCAACAAAAACATGAATTAATAACAAGCTAACAACATTTATTAAGACAGAGAACAAAGAGGCAGGAATAATAAC
ACTAGTCACCACAAAGAGATAATTTTGGAGTAAATAACTTGTTTGCACTATTTCCTTATGTGCAGGATCTCTCTCTCTCTCCCTCTCTCTCTCTAGAACG
CCATTGTTTGCTTTCTGGCACATGCCAACAACTACCTCCTATCTTTGCCCCTGGTCTTTTCTCATATAATTTACTCGCAAAAATCCTATCTTTTTGAAGG
AAAGGGCAGAATTGGGGGCCAAAGGCAACTAAGCAGTAATAATCTCAAGAAGAAGCATCAAATATTTTTGATAATTTCTCTGTAAATTCATTCATAAATG
GGTTCAGAAGGGCCTTCAGCGATCACAGTTCATGTAACTGGATTTAAGAAATTCCATGGTGTGACGGAAAATCCAACGGAGAAAATTGTCAGTAATTTGA
AGNNNNNNNNNNNNNNTTCTTGGGAGCTGCAATGTTCTTGAGACTGCAGGAGAGGGAGCACTTGGCCCATTTTATGAGCTTCTGGAGTCGACTGTGAGTG
GTGAAAATATTGATGATTTGGATGCTGGTCGTATTATTTGGCTTCATTTGGGAGTTAATAGTGGTGCAGCAAGGTTTGCTATTGAGACGCAAGCAGTGAA
CGAAGCTACTTTCCGTTGTCCTGATGAGCTAGGATGGAAGCCACAGAGAGTTCCGGTCTTCCCTTTAGACGGAGATATTTCACGAGTACGAGAGACTTCT
CTTCCCGTGGGAGAGATAACGAAGTCGTTGACAAGCATGGGATACCCCGTGATGCCTTCAGATGATGCTGGTCGCTTTGTGTGCAATTATGTGTACTATC
ATTCTCTTCGGTTCGCAGAGCATAATGGTAACAGATCTCTCTTTGTACATGTTCCTCTCTTTATGACGATCGATGAGGAGTCCCAGATGGAGTTCGTTGC
TTCTCTTCTCGAGGTTCTGGCTTCTTTGCGTTATTAGCATTGTACGAAGGTGTTCTGAAGCCGCATTGTGCTTTCAAGAGCGCATGTGCTGTTGTGTGCT
CACGACTGTAATCTGGGTCTAAAGACTGAAACTCTTGTATCCAAATAGATTTGTGTTTATTGGTTTGCTTGTGTTGCGTATGTTAAGTAGTGTTGTGTAT
ATTAAGTAATTTGTGGTTGTGATGTGAGTGATTTGATATTCATTATTTTTGTCAAGGGTTGATTGCCGAGAGACCCTCTGTTGTTCTATTGTTGCAGATA
TACCCAGGATGAACTTCTTGGACTCTTTTGCCCTCAG