Detailed information on CNT30326219


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519274Asparagus officinalisJuglans regia48.1881.7996.431428forward

Expression of CNT30326219

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MIKRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 2 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEASLRGQLLRGTMAA*

>peptide 3 (55 aa)
MHPFRKSGFFARISSRITTVIRVACTIKQTITDLMSHSQFHSLNLFILTHAWLNL*

>peptide 4 (44 aa)
LAVRVSPRECYLVDPASSHMLVSKIKPCMCKYEQIQTVKLRMAH*

>peptide 5 (44 aa)
MHLLDKRPTRALPGALMIHDNSTDRKALVPATHHSNFCPINFRW*

>peptide 6 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIEAYHGGDG*

>peptide 7 (28 aa)
MTTGRINQVALPRRHSHRQIPPISCCTSA

>peptide 8 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPLNHYSDPEGQHNRTEIL*

>peptide 9 (37 aa)
WRCECLLGSATWLILPVVICLSQRLSHACVSMNKFRL*

>peptide 10 (33 aa)
MPTRDRRMLLLGLRRHLMRNQSFWVPGGVWSQG*

>peptide 11 (32 aa)
MKYECPRLSLLIITPIPKANTIGPKSCDVIPC*

>peptide 12 (30 aa)
MMRRRHEGLAIRRVIMNHQSTGQSPRWPFI*

Sequence

>CNT30326219
TTGGCGGTGCGAGTGTCTCCTAGGGAGTGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAAC
AAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACATGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATAC
GTGCAAAAAAACCCGACTTTCGGAAGGGATGCATTTATTAGATAAAAGGCCAACGCGGGCTCTGCCCGGTGCTCTGATGATTCATGATAACTCGACGGAT
CGCAAGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGTGACGGAGA
ATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGT
GACAATAAATAACAATACCGGGCTCTTTCGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCC
AGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCTGGGTCGGCCGGTCCGCCCTAG
GGTGTGTACCGGCTGTCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGT
GCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCACAGGATTTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAAGA
GGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATT
AATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGA
CTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGG
AGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGG
TGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTACGCGGAGGCATCC
CTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCACGGAAGTTTGAGGCAATAACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCG
GCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGATGCCTCCGCGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCG
CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCC
GTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAA
AAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGAT
CGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCT
GACTATGAAATACGAATGCCCCCGACTGTCCCTCTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGAAATCCTGTGATGTTATCCCATGC
TAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGC
CGGCAGAAGGGACGAGACAGCCGGTACACACCCTAGGGCGGACCGGCCGACCCAGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATAT
ACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGA
CTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT
CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT
GAATGATGCGTCGCCGGCACGAGGGCCTTGCGATCCGTCGAGTTATCATGAATCATCAGAGCACCGGGCAGAGCCCGCGTTGGCCTTTTATCTAATAAAT
GCATCCCTTCCGAAAGTCGGGTTTTTTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCATGTACCATCAAACAAACTATAACTGATTTA
ATGAGCCATTCGCAGTTTCACAGTCTGAATTTGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGG
TAGCACTCCCTAGGAGACACTCGCACCGCCAAATCCCCCCAATTTCTTGCTGCACAAGTGCAGG