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Detailed information on CNT30325970


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 8e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696576Asparagus officinalisOryza sativa28.5543.6883.25197forward
CNT30677847Asparagus officinalisSetaria viridis23.7733.5486.59164forward
CNT30523218Asparagus officinalisSetaria italica31.1639.3885.58215forward
CNT30317753Asparagus officinalisCorylus avellana45.0744.6882.32311forward
CNT30546681Asparagus officinalisIpomoea triloba39.7158.381.75274forward
CNT30701199Asparagus officinalisQuercus lobata44.3527.7779.08306forward
CNT30617135Asparagus officinalisSesamum indicum33.3322.9388.26230forward
CNT3069058Asparagus officinalisQuercus suber38.1230.0680.23263forward
CNT30712284Asparagus officinalisGlycine max23.3334.2686.96161forward
CNT3042757Asparagus officinalisPrunus dulcis42.1748.0283.16291forward
CNT30186872Asparagus officinalisSecale cereale33.4846.2983.55231forward
CNT30283432Asparagus officinalisTriticum aestivum31.1640.8785.58215forward
CNT30221015Asparagus officinalisHordeum vulgare31.7441.5681.74219forward
CNT30386965Asparagus officinalisTriticum turgidum28.8441.8185.93199forward
CNT30563984Asparagus officinalisActinidia chinensis22.3274.0488.31154forward
CNT3086297Asparagus officinalisVigna radiata43.7725.9778.15302forward
CNT30554906Asparagus officinalisOryza glaberrima27.132.3585.03187forward
CNT30437818Asparagus officinalisAegilops tauschii31.1637.285.58215forward
CNT30244338Asparagus officinalisAvena sativa33.6241.885.34232forward
CNT30656490Asparagus officinalisTriticum dicoccoides31.1634.7985.12215forward
CNT3059678Asparagus officinalisArabidopsis lyrata23.3333.4781.37161forward
CNT30261175Asparagus officinalisBrassica rapa26.8139.1983.24185forward
CNT30611328Asparagus officinalisArabis alpina20.2930.783.57140forward
CNT30471244Asparagus officinalisSaccharum spontaneum31.1622.4785.58215forward
CNT30139599Asparagus officinalisLolium perenne45.5165.6981.85314forward
CNT3015042Asparagus officinalisZea mays26.3830.7485.16182forward
CNT30229571Asparagus officinalisAnanas comosus18.1230.3487.2125forward
CNT30687044Asparagus officinalisTriticum urartu33.4822.6784.85231forward
CNT30720165Asparagus officinalisTriticum spelta19.5728.7888.89135forward
CNT30348363Asparagus officinalisEragrostis tef33.3341.2984.35230forward
CNT30619612Asparagus officinalisCajanus cajan22.7537.4780.89157forward
CNT30596905Asparagus officinalisOryza meridionalis27.130.7685.03187forward
CNT30370989Asparagus officinalisOryza glumipatula31.8835.284.09220forward
CNT30645368Asparagus officinalisCannabis sativa15.5132.3383.18107forward
CNT30331117Asparagus officinalisDioscorea rotundata45.6533.2681.27315forward
CNT30148852Asparagus officinalisBrachypodium distachyon24.237.6186.83167forward
CNT30101647Asparagus officinalisOryza rufipogon31.1623.0784.65215forward
CNT30577582Asparagus officinalisOryza barthii27.129.485.03187forward
CNT30581397Asparagus officinalisEchinochloa crusgalli26.3831.0187.91182forward
CNT30496126Asparagus officinalisDigitaria exilis40.2940.8883.45278forward
CNT30117618Asparagus officinalisOryza nivara28.5543.7884.77197forward
CNT3050826Asparagus officinalisCucumis sativus20.2941.0680.71140forward

Expression of CNT30325970

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPWMLSRRTLRWRFAPPLPSPFPPFPRPDIGERENRKR*

Sequence

>CNT30325970
TGGGAAGAAATCCAAAAAAAATTATCTCGTCAAGCAGCTTGAATCAATACCTAGCGCATACTAATCACTCTAAAGATTTGTAGTCACTTAGTCGAAAATC
ACCAAATTCCATTCAAATTCTTCCCAATTGAAACACGTATTAACATTCTAAATCACAAACAAGAAAACAGCACCAGCACGAACAACAAAGCTAAAAAAAC
CCTAAAAATCCCATCTTTTTTTTTCTTGACAGCAAGACTTTTGGGGTGAGCGGAACAAAGAAACCCTAACCCTAACCGCCGAACCCATAAAGAGTCCTGC
CCTGCCTCTTGAGCGCGTACACCACATCCATCGCCGTCACCGTCTTCCTCCTCGCGTGCTCGGTGTAGGTCACCGCATCCCTGATCACGTTCTCGAGGAA
TATTTTCAGGACCCCCCTCGTCTCCTCGTAGATCAGCCCGCTGATCCTCTTCACCCCGCCCCTCCTCGCGAGGCGGCGGATCGCCGGCTTCGTGATGCCC
TGGATGTTGTCGCGGAGGACCTTGCGGTGGCGCTTCGCCCCGCCCTTGCCGAGCCCCTTCCCGCCCTTTCCTCGGCCTGACATCGGTGAGCGAGAGAACA
GAAAAAGGTAGAGTCTTTTTTTGGGGTGAGGAGAAAGAGGGGTCTGGGATTTTGGATGAGACGAGGGGGGTTATTTTTTGGGGATTTATA