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Detailed information on CNT30325711


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318541Asparagus officinalisCorylus avellana96.2465.4680.78307forward
CNT30700549Asparagus officinalisQuercus lobata52.6642.5380.36168forward
CNT30500451Asparagus officinalisCoffea canephora80.2523.9981.25256forward
CNT30615836Asparagus officinalisSesamum indicum33.2327.6886.79106forward
CNT30277485Asparagus officinalisChenopodium quinoa10037.479.62319forward
CNT3021362Asparagus officinalisCitrullus lanatus45.7722.4383.56146forward
CNT30727603Asparagus officinalisCorchorus capsularis99.0663.9779.43316forward
CNT30524728Asparagus officinalisPhaseolus vulgaris63.0137.2281.09201forward
CNT30503775Asparagus officinalisNicotiana attenuata60.8243.7985.57194forward
CNT30636701Asparagus officinalisCapsicum annuum98.1276.1680.19313forward
CNT3091042Asparagus officinalisSolanum tuberosum44.8339.1888.11143forward
CNT30222279Asparagus officinalisHordeum vulgare80.5685.185.6257forward
CNT30508626Asparagus officinalisSolanum lycopersicum50.7847.9387.04162forward
CNT30143812Asparagus officinalisMedicago truncatula96.2424.8282.08307forward
CNT30244810Asparagus officinalisAvena sativa80.5631.8186.38257forward
CNT30457014Asparagus officinalisSaccharum spontaneum78.6832.8585.26251forward
CNT30134072Asparagus officinalisLolium perenne80.5635.485.6257forward
CNT3066796Asparagus officinalisLeersia perrieri82.4567.6185.17263forward
CNT30718631Asparagus officinalisMalus domestica golden85.8947.7481.02274forward
CNT30338563Asparagus officinalisEragrostis tef80.2561.8484.38256forward
CNT30477892Asparagus officinalisArabidopsis halleri20.386.0790.7765forward
CNT30595456Asparagus officinalisOryza meridionalis80.5645.0984.82257forward
CNT30358465Asparagus officinalisLactuca sativa48.5914.8684.52155forward
CNT30424172Asparagus officinalisPapaver somniferum96.2443.9880.13307forward
CNT3054595Asparagus officinalisAmborella trichopoda63.6498.0784.73203forward
CNT30102778Asparagus officinalisOryza rufipogon16.320.5588.4652forward
CNT30580107Asparagus officinalisEchinochloa crusgalli81.550.185.77260forward
CNT30497454Asparagus officinalisDigitaria exilis80.5669.0985.6257forward
CNT30594668Asparagus officinalisEragrostis curvula72.168.2587.39230forward
CNT30336663Asparagus officinalisCynara cardunculus79.6254.3981.89254forward
CNT30723923Asparagus officinalisLupinus angustifolius61.7696.181.73197forward

Expression of CNT30325711

Peptides detected in this lncRNA

>peptide 1 (45 aa)
VDMAPVSLLLWMLKWVTINFTSAGQQETCPNPLCQPQHVQGSHHI*

>peptide 2 (48 aa)
MHGRRRARKMINLVNLKQNRLDNIVPDQLKPRIPKPMHQIILPPRKEII

Sequence

>CNT30325711
GGGTTGACATGGCCCCAGTAAGTCTCCTTCTGTGGATGCTCAAGTGGGTCACCATAAACTTCACTAGTGCTGGTCAACAGGAAACGTGCCCCAATCCTCT
TTGCCAGCCCCAACATGTTCAAGGTTCCCATCACATTTGATATGATGGTCTTGATGGGATTATACTTGTAATGCACGGGCGACGCCGGGCACGCAAGATG
ATAAATCTGGTCAACCTCAAGCAAAATCGGCTCGACAACATCGTGCCTGATCAGCTCAAACCTCGGATCCCCAAACCTATGCACCAAATTATCCTTCCTC
CCCGTAAAGAAATTATCAA