Detailed information on CNT30324879


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524944Asparagus officinalisPhaseolus vulgaris90.8832.0383.7319reverse complement
CNT30201819Asparagus officinalisPisum sativum32.198.0692.04113reverse complement
CNT30710142Asparagus officinalisGlycine max56.4144.3985.86198reverse complement
CNT30284960Asparagus officinalisTriticum aestivum57.5522.7590.1202reverse complement
CNT30384007Asparagus officinalisTriticum turgidum48.7219.5987.13171reverse complement
CNT30569656Asparagus officinalisActinidia chinensis31.3413.0697.27110reverse complement
CNT3083498Asparagus officinalisVigna radiata52.7179.7486.49185forward
CNT30237740Asparagus officinalisBrassica oleracea84.6224.7782.49297reverse complement
CNT3077654Asparagus officinalisBrassica juncea49.5738.6786.78174reverse complement
CNT3018194Asparagus officinalisZea mays70.3742.1591.09247reverse complement
CNT30610163Asparagus officinalisGossypium raimondii100.8566.5483.9354reverse complement
CNT30228329Asparagus officinalisAnanas comosus37.0462.896.15130reverse complement
CNT30364733Asparagus officinalisSorghum bicolor64.3992.6283.19226reverse complement
CNT30416238Asparagus officinalisPapaver somniferum70.9432.5189.16249reverse complement
CNT30604848Asparagus officinalisOryza punctata91.4598.1784.74321forward

Expression of CNT30324879

Peptides detected in this lncRNA

>peptide 1 (57 aa)
NKFKPEKDLSDSRRMRGKGIDRERSLVLIRLEDRNLIRICLVKRIIFSFDHKWKVFN*

>peptide 2 (56 aa)
MESVQLEHENVNELVLVTLWGRVEEGKRFSNEEKDPITSKELNEEPYEVKISCTVL*

Sequence

>CNT30324879
TAATAAATTCAAACCCGAAAAGGATCTTTCTGATTCTCGAAGAATGAGGGGCAAAGGGATTGATCGAGAAAGATCTCTTGTTCTTATTAGATTAGAAGAT
CGTAATTTGATCCGCATATGTTTGGTAAAAAGAATAATCTTCTCCTTTGATCATAAATGGAAAGTGTTCAATTAGAACATGAAAACGTGAATGAATTGGT
CTTAGTTACTCTTTGGGGCAGGGTGGAAGAAGGGAAAAGATTCTCGAACGAAGAAAAGGATCCAATTACTTCGAAAGAATTGAACGAGGAGCCGTATGAG
GTGAAAATCTCATGTACGGTTCTGTAGAGTGACAGTAAGGGTGACTTATCT