Detailed information on CNT30324534


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727322Asparagus officinalisCorchorus capsularis64.8965.383.37830forward
CNT30169882Asparagus officinalisPistacia vera82.851.3382.811059forward
CNT30568725Asparagus officinalisActinidia chinensis82.1790.682.211051forward
CNT3086267Asparagus officinalisVigna radiata64.8943.3482.89830forward
CNT3073617Asparagus officinalisBrassica juncea82.831.3582.341059forward
CNT30460578Asparagus officinalisSaccharum spontaneum82.9653.0282.091061forward
CNT30608559Asparagus officinalisGossypium raimondii80.6967.6381.11032forward
CNT30217449Asparagus officinalisKalanchoe fedtschenkoi81.3968.9982.81041forward
CNT3032754Asparagus officinalisTheobroma cacao81.1679.1281.71038forward
CNT30120444Asparagus officinalisCitrus clementina82.866.3982.251059forward
CNT30114596Asparagus officinalisEutrema salsugineum69.6686.2582.27891forward

Expression of CNT30324534

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVLTKICMPPRSLKTRCRVDSF*

>peptide 2 (42 aa)
MRRCWSGGIPSLSWIFALTLSMVSEDSTSSVIVLPVSVFTKIC

>peptide 3 (53 aa)
MPSLSWILALTLSIVSELSTSNVMVFPVRVLTKICMPPLRRRTRWRVDSFWML*

>peptide 4 (52 aa)
MSLCWSGGMPSLSWIFALTLSMVSELSTSNVMVLPVRVLTKICIPPRSLRTR*

>peptide 5 (60 aa)
MKSGFLLDIVISQSPAVLELFSSEDKPLLVRRNALLVLDLGLDIINSIGALDLQSDGFSG*

>peptide 6 (60 aa)
MEGRLLLDVVIRKGPAILKLFASEDETLLVGRDPFLVLDLCFNIVDGVRGFNLECDCLAG*

>peptide 7 (96 aa)
NTTSIIYLALYLKTSIATKDNSINTENHGFFLKTPTPIDAKPNTSNERPETTTTIRANPSPSFTYHHRGDEAQAASLRRSTSADPAESPPYPVSSP*

Sequence

>CNT30324534
GAAATACTACTAGTATTATTTACTTAGCATTGTACTTAAAAACATCCATAGCAACTAAAGACAATAGCATAAACACAGAAAACCACGGTTTTTTTTTAAA
AACCCCAACACCAATAGACGCGAAACCAAATACATCCAACGAAAGACCAGAAACCACGACGACCATCAGGGCAAACCCATCACCATCATTCACATATCAC
CACCGCGGAGACGAAGCACAAGCTGCTTCCCTGCGAAGATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTTATCCTGTATCTTCGCCTTGACGTTGTC
GATCGTGTCAGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCCGTCAAGGTCTTGACAAATATCTGCATCCCTCCACGAAGCCTCAGCACCAAGTGGAGG
GTCGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCT
TGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATTCC
TCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGC
CTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGACCTCCAGAGTGATGGTTTTTCCGG
TTAGGGTCTTGACAAAAATTTGCATGCCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCCAAAGTACGGCCATC
CTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTC
TCGACCTCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCATGCCACCCCTGAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGA
TGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTTGC
TTTAACATTGTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCACAAAGATCTGC