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Detailed information on CNT30323793


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Asparagus officinalisOryza sativa63.296.3898200reverse complement
CNT30678576Asparagus officinalisSetaria viridis34.4921.5495.41109reverse complement
CNT30550263Asparagus officinalisIpomoea triloba53.481.4696.45169forward
CNT30637323Asparagus officinalisCapsicum annuum49.0510.9890.32155forward
CNT3098505Asparagus officinalisSolanum tuberosum53.4817.2394.08169reverse complement
CNT30304298Asparagus officinalisTriticum aestivum65.517.8297.58207reverse complement
CNT30396010Asparagus officinalisTriticum turgidum65.5122.6798.07207reverse complement
CNT30569652Asparagus officinalisActinidia chinensis53.1628.1995.83168reverse complement
CNT30585815Asparagus officinalisMusa acuminata60.767.9192.19192forward
CNT30147387Asparagus officinalisMedicago truncatula53.4825.396.45169reverse complement
CNT30435015Asparagus officinalisAegilops tauschii65.5118.3797.58207reverse complement
CNT30662061Asparagus officinalisTriticum dicoccoides65.5110.7997.58207reverse complement
CNT3081478Asparagus officinalisBrassica juncea53.814.6897.06170forward
CNT30143344Asparagus officinalisLolium perenne64.249.0798.03203reverse complement
CNT3017904Asparagus officinalisZea mays64.2412.3398.03203reverse complement
CNT30655385Asparagus officinalisRosa chinensis53.87.2298.24170forward
CNT30203595Asparagus officinalisHelianthus annuus53.489.2295.86169forward
CNT30687939Asparagus officinalisTriticum urartu54.4343.7797.67172forward
CNT30721611Asparagus officinalisTriticum spelta39.5627.1196125reverse complement
CNT30369805Asparagus officinalisOryza glumipatula63.2913.9597200forward
CNT30420891Asparagus officinalisPapaver somniferum49.055.7794.84155reverse complement
CNT30151602Asparagus officinalisBrachypodium distachyon64.2440.5297.54203reverse complement
CNT30104648Asparagus officinalisOryza rufipogon37.3420.2497.46118reverse complement
CNT30575706Asparagus officinalisOryza barthii63.298.2197200forward
CNT30581589Asparagus officinalisEchinochloa crusgalli64.2420.898.03203reverse complement
CNT30116696Asparagus officinalisOryza nivara63.295.0498200reverse complement
CNT30726123Asparagus officinalisLupinus angustifolius43.674.1696.38138forward
CNT3040451Asparagus officinalisMarchantia polymorpha30.716.5292.7897forward

Expression of CNT30323793

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MYKLRKSSEKMVWYIVVIVRVSLRNKEKGACRTHEGLPVRYWRKVGMTSSPHGPYGLGHTRATTAMTMGSKAVRRSESR

Sequence

>CNT30323793
TCCGAAATCGATCACCTTGCACGCTCATATAACTGTCTTTTGTTGTAAAACTTGAACTTGACTTCAATAAAGTAATATTATGTATAAGTTAAGAAAGAGC
TCAGAAAAAATGGTGTGGTACATAGTGGTAATAGTACGCGTCTCGCTCCGAAACAAAGAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGAGAT
ACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAACGGCAATGACAATGGGAAGCAAGGCTGTAAG
GCGGAGCGAATCCAGA