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Detailed information on CNT30323712


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30118019Asparagus officinalisOryza nivara98.0499.4382.86350forward

Expression of CNT30323712

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MNLIPASDICFHIELLRSAATFCKSSALLFPSQKDSNANLSSLFGPIRG*

>peptide 2 (42 aa)
LVGVKPLGHLHSRKGGISSCHREVGVKPNLSTAPAVPLGNST*

Sequence

>CNT30323712
TACTAGTTGGTGTCAAACCACTTGGTCATCTCCATAGCAGGAAGGGTGGCATTTCCTCTTGCCATAGAGAAGTAGGTGTCAAACCCAATCTCTCCACCGC
TCCAGCCGTACCTCTTGGGAACAGCACCTAGCATCGCCGAGGTGTCAAGAACTTGGTCATAGTACGAGAAGGTGTTGCTAGGAATGAATCTGATCCCGGC
ATCAGACATTTGTTTCCATATTGAACTCCTAAGATCAGCAGCAACTTTCTGCAAATCATCAGCACTGCTTTTCCCATCCCAAAAAGACTCCAACGCAAAC
TTGAGCTCCCTCTTCGGGCCCATACGAGGATAACCAACAATGTGGGAAGCCATTTTT