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Detailed information on CNT30323690


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MML8|YCF4_DIOEL, E-value = 6e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Asparagus officinalisOryza sativa21.9112.186.58559forward
CNT30677978Asparagus officinalisSetaria viridis18.3832.6488.06469forward
CNT3047368Asparagus officinalisPrunus dulcis8.0827.9584.47206forward
CNT30589638Asparagus officinalisMusa acuminata3.6544.7184.9593reverse complement
CNT3018021Asparagus officinalisZea mays21.9914.4687.34561forward
CNT30610466Asparagus officinalisGossypium raimondii11.1334.5982.75284forward
CNT30227829Asparagus officinalisAnanas comosus5.5730.2196.48142forward
CNT30354656Asparagus officinalisLactuca sativa21.3219.0485.85544forward
CNT30152456Asparagus officinalisPrunus persica4.6324.5388.98118reverse complement
CNT3058960Asparagus officinalisAmborella trichopoda16.1120.1888.81411forward
CNT30149719Asparagus officinalisBrachypodium distachyon3.6841.2387.2394forward
CNT30726954Asparagus officinalisLupinus angustifolius21.620.7587.3551forward

Expression of CNT30323690

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MIMRFKFKKFYIIPSFFFFYSFYLSKKKKSFFFFSFGAHFSYCNFLFCFVYVYIFGKYVNQDTLKKLFSTLS*

>peptide 2 (67 aa)
MNSYLVRFISKYFNWYAQEIGQFGSFFLNFSRSQILISTRQGNGSLASDFHIKNTTRKKTLFNLHSD*

>peptide 3 (46 aa)
MQNYMEMILIVCFDQLYRFLVYSYTKLLYLCLWVFFYHFVQQEKFF*

>peptide 4 (40 aa)
MKFGPIRYDIVSRQSYFFGHEEIKKPLQSPEILGPLKGQK*

>peptide 5 (38 aa)
MHLCRYHVSACLSFVFVKSHILYHITLKKYLYYDSVLK*

>peptide 6 (32 aa)
MQDMGGKSMLSFFSFFICALLMNCFIYQLYLI*

>peptide 7 (30 aa)
MQISCIRMPFICIRKKPHIVPYYTQKISVL*

Sequence

>CNT30323690
AACCATGTGTCGAGTGAAATCCGATCCATAAATCAGTAACTAAAAGAATCGAAAAAGCTTTTATTGTGTCACTTAAGTTATAGAAGAATTCCTGAACCCA
AGAGTTAAAAATGACAAGTTCTTCATTACCCAAAATAAAATAACCACTTAGAATAGCGAAACAGATTATATTTGTCGAAAAATGCAAAATTATATGGAGA
TGATACTCATTGTGTGTTTTGACCAATTGTATCGTTTCCTTGTGTATTCCTATACGAAGCTTTTGTATCTGTGTCTCTGGGTATTCTTTTATCATTTCGT
CCAACAAGAAAAGTTCTTCTAATTCTAGGAATTTTTCTAGAACATTTTTCTCTTGAATATCATTCAAAAAAGTTTCGGATTGTCTAGTATTCCACCAATT
AATAACCCAAGGTTCCAGACTTTTTTGAAAGGAGAGAGAGACCGACCAGGGCAAAAATACTATAGATGCAAGATATGGGAGGGAAGTCAATGCTTTCTTT
TTTTTCATTTTTTATTTGTGCATTGTTAATGAACTGCTTCATTTATCAACTCTATTTGATCTGATGTTTCTCTAAAGCACAAGTTCTATAACAAGGTATC
GAACCTATGGATCTATTCCCATTTTTGTATATTTGTTAAAATAATTTAGTCCTTAGATCTAGAAGGAATATAGAAATAGAATAAGCGCCCCTTTTCGGAT
GAAAAAAAAACTAGAAATATATATCAAAAATATATATATGAAAGTAAATAGATAAAGGAAATAAGATTTCCGGATATCTCAATCGGACAAATTCGAAAGA
ATTTCATCTGCATTTGTTCCTTTCGATAAATACTCCAAAAATCTACTTGAAGTAACGAATTGGATTTCAAGACAAAAAACCCTCCCGGATTAATTCCATT
AATTATTTCGAAATGTTGCACCGTCTAAGCACAGTACAGGAATACGATAACGATATCAGTTCAAAATCTGAGGCCTAACCTAAAAGAATGAATTCTGTAT
TACGAAAAAAATATTCGGATATTTGATGAATTCATACTTAGTTCGGTTCATTTCAAAATACTTCAATTGGTACGCGCAAGAAATAGGCCAATTCGGCAGC
TTTTTTCTCAATTTCTCGCGGAGTCAAATTCTCATCAGTACGCGTCAAGGGAATGGTTCCTTGGCCTCTGATTTCCATATAAAGAATACGACGAGGAAAA
AGACCCTCTTTAACCTCCATTCTGATTGATTGTATATCTTTCATAAAGAAGCGAAGGAAGATGCGACGATTTATTCCAGGGAATCCCCAACGAAAAATAC
ACATTATTCCTTCTTTTCTATCGAATCGGTCATAACCACTACCTACATTCCATGAAATTGTGCACCACAAATAGGAACTAATGAATAGACCCGCGATCCC
ATAGAAAGACATCACGATCCCTTGTGGAAAAAAAATGATTTGCTGAGATGGAAATCCGGGTATCAGATTCCTACTAAGATAACTGGAAGTTCCAACCAAT
AAGAATCCTAGTGAACCTAAAAAAAGGATACAGGCCCAGAAAAAATTACTTGCTTTTCGAGACCCTCGTATAAGCTCTATCCATATATGTTCTGATCGCC
AGTTCATACTATACTAGATCCAGTTGCATTCGATTGGAATTGAGAAAAAAAAATTGACTTTTCTTGATGCCGAAGTAACTTTCATCAACTAGCACTAGTC
TGATATGAACCATTAGGAGTAATTGGTTAGATACATTGACTTTCTATTATAAAAATATTCGCCGATCATTTTTAACCAGATATACCCGTATATCCATGCA
TTTATGCAGATATCATGTATCCGCATGCCTTTCATTTGTATTCGTAAAAAGCCACATATTGTACCATATTACACTCAAAAAATATCTGTATTATGATTCA
GTGTTGAAATAAATTAATGAAATTTGGTCCCATCCGATATGATATCGTATCTAGACAATCTTATTTTTTTGGACATGAAGAAATAAAGAAGCCATTGCAA
TCGCCGGAAATACTAGGCCCACTAAAGGGACAAAAATAGAGGGTAAGTTAAGATCTGTCATAGAATGGGTACCTCGATTTAATATTTGTACCTATTATAA
AGATATCTTATGATAAGTATAAACTATTATAAATAATATTTAAGTAATTAATAAGTGCAAGGAATGAGAACTAAATGAAGTGTACCTATTCATCTTTCTA
CACGAATATGTATGATAATGCGATTTAAGTTTAAGAAATTTTATATTATCCCATCCTTTTTTTTCTTTTATTCTTTCTATCTTTCGAAAAAAAAAAAAAG
TTTTTTTTTCTTTTCTTTTGGTGCCCATTTTTCGTACTGCAATTTTTTGTTTTGTTTTGTATATGTATATATATTTGGAAAATATGTAAATCAAGACACT
TTGAAAAAATTATTTTCAACTCTAAGTTAAGCATGCAAAAAATTCATTATTTTAAATAAAAGTCCAAGTTAAGGCTTAAGTCAAGTATACTACTTTGAAA
ATCATTTCTTAAGAAATTTATTTAGAGTTATCATAAAAGGTGAACTTAAAT