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Detailed information on CNT30323623


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672466Asparagus officinalisSetaria viridis54.4947.4981.76170forward
CNT30520930Asparagus officinalisSetaria italica37.1842.4984.48116forward
CNT30546688Asparagus officinalisIpomoea triloba51.2837.2183.12160forward
CNT30378189Asparagus officinalisArabidopsis thaliana51.638.9885.09161forward
CNT30730167Asparagus officinalisCorchorus capsularis27.8811.1390.887forward
CNT30195181Asparagus officinalisPisum sativum44.8729.5483.57140forward
CNT30160107Asparagus officinalisPistacia vera44.8731.3285.71140forward
CNT3093993Asparagus officinalisSolanum tuberosum55.1332.9581.4172forward
CNT30288144Asparagus officinalisTriticum aestivum39.132.9785.25122forward
CNT30224124Asparagus officinalisHordeum vulgare51.2853.8783.75160forward
CNT30386294Asparagus officinalisTriticum turgidum39.133.1585.25122forward
CNT30562819Asparagus officinalisActinidia chinensis31.4119.4482.6598forward
CNT30233912Asparagus officinalisBrassica oleracea21.7930.3686.7668forward
CNT30509848Asparagus officinalisSolanum lycopersicum49.0466.5282.35153forward
CNT30658093Asparagus officinalisTriticum dicoccoides39.127.9285.25122forward
CNT30608684Asparagus officinalisGossypium raimondii33.3324.788.46104forward
CNT30646927Asparagus officinalisRosa chinensis33.0130.6590.29103forward
CNT30625732Asparagus officinalisDaucus carota33.3348.684.62104forward
CNT30689637Asparagus officinalisTriticum urartu54.4917.4283.53170forward
CNT30338600Asparagus officinalisEragrostis tef47.4430.8383.78148forward
CNT30480842Asparagus officinalisArabidopsis halleri20.8313.3587.6965forward
CNT30363108Asparagus officinalisSorghum bicolor39.115.2586.07122forward
CNT30570869Asparagus officinalisVitis vinifera44.8742.0486.43140forward
CNT30704438Asparagus officinalisPrunus avium25.3232.7888.6179forward
CNT30645139Asparagus officinalisCannabis sativa33.0137.3287.38103forward
CNT3031228Asparagus officinalisTheobroma cacao33.6542.3485.71105forward
CNT30120974Asparagus officinalisCitrus clementina44.8723.185140forward
CNT30101083Asparagus officinalisOryza rufipogon48.7228.4682.89152forward
CNT30116334Asparagus officinalisOryza nivara48.7224.9282.89152forward
CNT30594407Asparagus officinalisEragrostis curvula50.9655.9984.91159forward

Expression of CNT30323623

Peptides detected in this lncRNA

>peptide 1 (64 aa)
GITVKSTPIKVTLLQQQMICFTPMVKARRACARVNNQYCTRSKIEMPTSKPPMVESITNTAQSA*

>peptide 2 (32 aa)
MFLMKSRCPGASIIVQSYVVVSNFHRALSMVSP

Sequence

>CNT30323623
GGGTATTACAGTTAAAAGTACACCAATAAAAGTTACCTTGTTACAGCAACAAATGATTTGCTTCACTCCCATGGTGAAAGCAAGAAGAGCGTGTGCACGG
GTCAATAACCAATACTGCACACGCTCAAAAATAGAGATGCCAACCTCAAAACCGCCAATGGTGGAGTCAATAACCAATACTGCACAGTCAGCTTGAGAGG
TACCGGTAATCATGTTCTTGATGAAATCACGATGCCCAGGAGCATCAATAATAGTGCAGTCGTATGTGGTGGTCTCAAACTTCCATAGAGCATTGTCAAT
GGTCAGCCCTCT