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Detailed information on CNT30323473


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019929Asparagus officinalisCitrullus lanatus16.9830.8888.81134forward
CNT30360303Asparagus officinalisLactuca sativa17.7426.9787.86140forward
CNT30434475Asparagus officinalisPapaver somniferum16.3533.5987.6129forward

Expression of CNT30323473

Peptides detected in this lncRNA

>peptide 1 (73 aa)
FRALACESIKPRLHFDKTTSPALDKRPRLQDLRARMLEVARLHSPRARLFEIRPRLKLSPAAHLARVRRPDLA*

>peptide 2 (55 aa)
FELSPVSPSNPACTSTKRPRLHSTNDLVCKIFEPACSRSPDFTPLELACSRSDLA*

Sequence

>CNT30323473
TTTCGAGCTCTCGCCTGTGAGTCCATCAAACCCCGCCTGCACTTCGACAAAACGACCTCGCCTGCACTCGACAAACGACCTCGTCTGCAAGATCTTCGAG
CCCGCATGCTCGAGGTCGCCCGACTTCACTCCCCTCGAGCTCGCCTGTTCGAGATCCGACCTCGCCTGAAGCTTTCGCCTGCAGCTCATCTCGCTCGAGT
TCGCCGACCGGACCTCGCCTGAAACCCATCGACTTCGAGCTCGCCAATAGAGCATCGCCTCGACCTGGACCTCGCCTGAAGCCTGTCGATGTCGCCGGGA
GCTCGCCGCCAACCAGGAGGAGTCGAACTTCTTGGGGTTTCGTGAAATTTACCTTGGAAAAACAGTAAAGCCTTCGATCAATACACTAATTTTAGACCCC
TTTATTCTACTCTTGATTAAATGATATATATTACTTTGAACACTTTGGATAGAGATTCCTAGATAATTTCTGGTTGGCTTGAAATTGAAGATAGCATTAG
TGGAGTTGGTCAGTGAATCAAGTACAATGTAGTTTCTTTTTATATCAAGAAAGAAAATTTATTTTTTAAATTGTAATCTTGTCTTGAAACTGAAATCAAC
CTTTGCTTTCATAATCACGAGTATAATAAGACAATATGTAATCTTTGACACCAGGTTAATTCAACACTTGCTTTAGTCTTTATTTGTGGAGACAGTAAGT
CCCTCCCTACAACTCATGAATTAAGAATTCTCAAAGCAACAAGGCTTTCTCAATAAGGATTATGCGCAAATGAAACCTTTGGCAAAAAT