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Detailed information on CNT30323045


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QLY5|METE1_ORYSJ, E-value = 3e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30563287Asparagus officinalisActinidia chinensis20.0420.6986.4696forward
CNT30440702Asparagus officinalisAegilops tauschii49.0671.2180.43235forward
CNT30211114Asparagus officinalisHelianthus annuus12.9426.0587.162reverse complement
CNT30689644Asparagus officinalisTriticum urartu24.638.0984.75118forward
CNT30721908Asparagus officinalisTriticum spelta49.0674.1380.43235forward
CNT30361575Asparagus officinalisSorghum bicolor49.6937.2583.61238forward

Expression of CNT30323045

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRRCQTQSLHRSSRTSWEQHLASPRCQELGHSTRRCC*

>peptide 2 (49 aa)
MNLIPASDICFHIELLRSAATFCKSSALLFPSQKDSNANLSSLFGPIRG*

Sequence

>CNT30323045
GTGGCATTTTAGAGTTGAGTTAGCTTACTAGTTGGTGTCAAACCACTTGGTCATCTCCATAGCAGGAAGGGTGGCATTTCCTCTTGCCATAGAGAAGTAG
GTGTCGAAGCCAATCTCTCCTCCATTCCAACCATACCTCTTCGGAACAGCACCTAGCATCGCCGTTGTGTCAAGAACTTGATCATAGTATGAGAAGGTGT
CAAACCCAATCTCTCCACCGCTCCAGCCGTACCTCTTGGGAACAGCACCTAGCATCGCCGAGGTGTCAAGAACTTGGTCATAGTACGAGAAGGTGTTGCT
AGGAATGAATCTGATCCCGGCATCAGACATTTGTTTCCATATTGAACTCCTAAGATCAGCAGCAACTTTCTGCAAATCATCAGCACTGCTTTTCCCATCC
CAAAAAGACTCCAACGCAAACTTGAGCTCCCTCTTCGGGCCCATACGAGGATAACCAACAATGTGGGAAGCCATTTTTC