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Detailed information on CNT30322845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673277Asparagus officinalisSetaria viridis13.6980.1885.71182forward
CNT30404178Asparagus officinalisBeta vulgaris26.4191.4178.35351forward
CNT30555769Asparagus officinalisOryza glaberrima26.7983.7682.3356forward
CNT30721822Asparagus officinalisTriticum spelta9.0330.3885.83120forward
CNT30597233Asparagus officinalisOryza meridionalis26.7996.7481.74356forward
CNT30104304Asparagus officinalisOryza rufipogon26.6410082.49354forward
CNT30578403Asparagus officinalisOryza barthii26.7110082.54355forward
CNT30333330Asparagus officinalisCynara cardunculus26.7140.381.41355forward

Expression of CNT30322845

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNSYRFCFFVFRYGLVRRVGECCVWAQFRYNEV*

>peptide 2 (33 aa)
CKRAKLCPTMKWLKRISPLLSQVSRATNKTRVQ*

>peptide 3 (33 aa)
MIKKTCSNKKKNLQLDYINMVRIYIMPNIKVQV*

>peptide 4 (42 aa)
MKLITRIKLELNEFIPLLLLCIQIRPCEKSRRMLCLGPIQVQ*

>peptide 5 (37 aa)
MYPIERKKEKACLRDCPNKAILKVNSKFAGKVKQKVF*

>peptide 6 (49 aa)
MNLIPASDICFHIELLRSAATFCKSSALLFPSQKDSNANLSSLFGPIRG*

Sequence

>CNT30322845
TTGTAAACGGGCAAAACTTTGTCCAACAATGAAATGGTTGAAAAGGATTTCTCCGCTCCTTTCTCAGGTTTCGAGAGCAACAAATAAGACACGGGTCCAA
TGAGTACTGGAACTGTATCAACTCCAAGCTGCATCAGAAGGACAAAAAGAATATAGCAAACAACTAAAAATAAGTTAGATGTCCATGTTATATTCAAAAT
ACTAGTTATCCACAAGATGTACTTATTTCAGAGAAACTGAATAGAAAACAAATGATGATATGCAAACATTACGCATATAAGACTGTTCACCATCTTCCGG
TTCAATTATTTATATAAATACATCTAATAATCGGAACTGGCATGTACCCAATTGAAAGGAAAAAAGAGAAGGCATGCTTGAGAGACTGCCCCAACAAGGC
AATCCTTAAGGTTAACTCTAAATTTGCTGGAAAGGTAAAACAGAAAGTGTTTTAAGTAGAAAATTCAGACTAATTTAAAAGTGATTTAACTAGATGATAA
AAATTTGAAACATATATTGTTCACCATTTTCCACACCATAGGCCACAGTTAACGTCTATATGATTAAAAAAACGTGTTCAAACAAAAAAAAAAATCTGCA
ATTAGATTACATCAATATGGTGAGAATCTATATTATGCCAAATATAAAGGTGCAAGTTTAATGCATTGTGAATGACAACTTCATATTGAAAGGCCTACAA
ATTTTCATTATAAAACCTCTTTGTTCTATAAGATCTATTATGAATTGAAGTAGTTTTCAGCGTGAAAACGTATCTTGTAACAGCACGAACAAAGTTGCAA
GATATCTAAGCATGAAACTCATTACCAGAATAAAACTAGAACTAAATGAATTCATACCGCTTTTGCTTCTTTGTATTCAGATACGGCCTTGTGAGAAGAG
TAGGAGAATGCTGTGTCTGGGCCCAATTCAGGTACAATGAAGTGTAGTTGGTGTCAAACCACTTGGTCATCTCCATAGCAGGAAGGGTGGCATTTCCTCT
TGCCATAGAGAAGTAGGTGTCAAACCCAATCTCTCCACCGCTCCAGCCGTACCTCTTGGGAACAGCACCTAGCATCGCCGAGGTGTCAAGAACTTGGTCA
TAGTACGAGAAGGTGTTGCTAGGAATGAATCTGATCCCGGCATCAGACATTTGTTTCCATATTGAACTCCTAAGATCAGCAGCAACTTTCTGCAAATCAT
CAGCACTGCTTTTCCCATCCCAAAAAGACTCCAACGCAAACTTGAGCTCCCTCTTCGGGCCCATACGAGGATAACCAACAATGTGGGAAGCCATTTTTCT
GATCATAACAGATAAAAAAACAAAGTTTT