Detailed information on CNT30322630


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3087354Asparagus officinalisVigna radiata4.5541.6386.9692forward
CNT30598088Asparagus officinalisFraxinus excelsior5.5420.791.07112reverse complement
CNT30646316Asparagus officinalisCannabis sativa4.624.4189.2593forward
CNT30174954Asparagus officinalisVigna angularis6.2349.2281.75126forward

Expression of CNT30322630

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MISPNAKRVKTFNRGGSIYNNETSGGSKFCNAPPRNPGVGTLLDLMD*

>peptide 2 (46 aa)
MYAKQERLPSSRNAFELRFVHNFNCGTEAQEMLPMVILLLCRVQSQ*

>peptide 3 (45 aa)
MIAQAQEKKAKHLFSILRFKDKDFSCILILDVRKARKTPFLQECF*

>peptide 4 (39 aa)
MCRWRRNQAAIPAWHKKKKINDCSSTGKESETSIFNLAI*

>peptide 5 (35 aa)
MEEAGGSSLQPSANTGEHGXXXXQPSPSAWRGSSR*

>peptide 6 (48 aa)
MSWCRECALIIWLLVEYDNVNVTCVRACSAVSVSFWVILSSSANDFHN*

>peptide 7 (61 aa)
KSRGNYQGNNAHICLWASTSYFVGLTTNRPPRSTVVFNSLPMFIVEDRPWVGLCFDFVSLK*

>peptide 8 (63 aa)
MHLGSMSIPIKSINTNHITLSRVRVLQVPNNKILQGVYVQLNPIDPSILLNYQQASPMVIISK*

>peptide 9 (67 aa)
MLILELGIWFIPFTLVVAPWRRLVVLVSNLQQILESMXXXXRSRLHPLGEDPVDDICVVKNCDRCFW*

Sequence

>CNT30322630
GAAAAAGTAGGGGAAATTATCAAGGAAACAATGCCCATATCTGTCTTTGGGCCAGTACGTCTTATTTTGTAGGGTTAACTACTAATAGACCCCCTCGAAG
TACCGTCGTTTTTAACTCACTACCCATGTTCATTGTCGAAGATAGACCCTGGGTTGGGCTTTGTTTTGACTTTGTTAGCCTCAAATAGACTCGATGATTT
CACCCAATGCTAAGAGAGTAAAGACGTTTAACCGAGGGGGGTCCATCTACAACAATGAAACTTCAGGTGGTAGTAAGTTCTGTAACGCTCCGCCCCGGAA
TCCCGGAGTCGGTACGCTATTAGATCTGATGGACTAGCCTCACAAACCACCACATGTCTTTTCAGCACGTTTTGTCCTCACTCACGCGCTCCCTGGAAAA
CTTCCCAGGGGGTCACCCATCCTAGAATTTCTCCACGCCAAGCACGCTTAACTTTGGAGTTTCTAAGAGTTGGGTTCCCGAAAAGAAGATGCATCTTGGT
AGTATGAGTATTCCAATCAAATCTATTAATACTAATCACATCACCCTCTCAAGGGTTAGGGTATTACAAGTTCCAAACAACAAAATACTACAGGGGGTCT
ATGTGCAATTAAACCCCATCGATCCGAGTATCCTCTTAAACTATCAGCAGGCTTCACCAATGGTTATAATATCAAAGTAATTAGCTAACCACACACATAA
GCAAGATTAAGAAAAGTCATCAGCAAACTCCCTCTATATGCGTATATAAGAGGCCACCAAGGCCTTCAGGAGGTGGAAGCAAGGAAAAGGAGACCTGAAC
CATGCTGATACTCGAGCTGGGCATCTGGTTCATCCCTTTCACTCTTGTTGTTGCCCCATGGAGGAGGCTGGTGGTTCTAGTCTCCAACCTTCAGCAAATA
CTGGAGAGCATGGCNNNNNNNNNNCGCAGCCGTCTCCATCCGCTTGGCGAGGATCCAGTCGATGACATTTGTGTTGTAAAGAATTGTGATCGATGCTTCT
GGTAGACTTCACAAGTTCGTATTTAGCAGGCAAGTTTTTTTTTTCGTAGGGTTGGAATACTAACTTAGCGCGCTGCTTTCTCCTTGTGACTCTACGTATT
CGACGCAAAGAGAAGCTAAGCTAAGACATGAAGGGAAGCAAAATCTATGGCGTTACTTTTAAAGCTTTGGTCGTCCAGCTACAGCAAGGCTCAAGTTAAA
AGAGAGAGTAGATATTTTGGTCAGATAAAGTGAAGCGGATGAAGGGTTTTCTATTGATTAGGATGCCGTTTCAATGAGTTGGTGTAGGGAATGCGCCTTG
ATTATATGGCTACTTGTAGAATATGATAATGTGAACGTTACGTGTGTGAGAGCTTGTTCAGCTGTCAGCGTTAGCTTCTGGGTTATTTTGTCTTCTTCAG
CTAATGATTTCCATAATTAGAGTAGTTTGAGAGGGAAGTACCTGCTTGATTTTTTTTTTCTTCTCTCTTCTTCCAGTTTCGTAGAAATTCTCAGGTATAT
ATCTTGATGTCCAACGTCACTTGATGTGCCGCTGGAGGCGCAACCAGGCAGCAATTCCTGCTTGGCACAAGAAAAAAAAAATTAATGATTGCTCAAGCAC
AGGAAAAGAAAGCGAAACATCTATTTTCAATCTTGCGATTTAAAGATAAAGATTTCTCTTGCATCCTGATTCTTGATGTACGCAAAGCAAGAAAGACTCC
CTTCCTCCAGGAATGCTTTTGAATTAAGATTCGTGCATAATTTCAATTGTGGGACTGAAGCTCAGGAGATGTTACCTATGGTAATCTTGTTGCTTTGCAG
AGTACAAAGTCAGTGAGCATTGTCTTATTCCCTTGAGAAAAGTAGAAAGGCACGAACAAACCAACCAGAGCATCTAAAAGGACTTGAGATCTTTGATGTT
GATCTAATCTAACCAGATTAGTTAACATTATCTATCACCAACCAAAACCATATAAAATATAGAATCAAAAATTTTGAAGCTCGCCGCTTGTGACAATGTT
TATGGTGGGAATTTGGTTGCAC