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Detailed information on CNT3032244


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Theobroma cacaoNymphaea colorata79.5551.6783.48914forward
CNT30528694Theobroma cacaoEucalyptus grandis57.6260.0787.16662forward
CNT30727322Theobroma cacaoCorchorus capsularis81.273.4187.35933forward
CNT30629220Theobroma cacaoVigna unguiculata79.2984.3583.32911forward
CNT30169882Theobroma cacaoPistacia vera79.3744.2184.43912forward
CNT3096972Theobroma cacaoSolanum tuberosum69.866.2383.54802forward
CNT30562217Theobroma cacaoActinidia chinensis57.5365.6485.48661forward
CNT3086353Theobroma cacaoVigna radiata77.3741.4883.91889forward
CNT30172216Theobroma cacaoTrifolium pratense79.4653.5882.26913forward
CNT30312399Theobroma cacaoCamelina sativa79.3769.8383.11912forward
CNT3077383Theobroma cacaoBrassica juncea79.4670.4583.24913forward
CNT30264722Theobroma cacaoBrassica rapa79.4686.2982.69913forward
CNT30217431Theobroma cacaoKalanchoe fedtschenkoi79.4667.4384.12913forward
CNT30622898Theobroma cacaoDaucus carota79.5552.4183.48914forward
CNT30356895Theobroma cacaoLactuca sativa74.8590.3483.37860forward
CNT30120658Theobroma cacaoCitrus clementina79.3790.6683.77912forward
CNT30111662Theobroma cacaoFicus carica79.2967.3883.21911forward
CNT30334103Theobroma cacaoCynara cardunculus79.3745.2683.22912forward
CNT3051100Theobroma cacaoCucumis sativus79.7264.4683.73916forward
CNT30114596Theobroma cacaoEutrema salsugineum79.8188.7782.44917forward

Expression of CNT3032244

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MKCRLFLNVIISQSSTVLELLPSKDKPLLVWRDSFLVLDLGLHVVDGVGAFNFQGYGFTRQGLDKDLHPTTET*

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSRVIVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 4 (31 aa)
MVSELSTSKVMVFPVRVLTKICIPPRSLKTK*

Sequence

>CNT3032244
TTGATCAAAGAAGACAGATAGCAGTAAATATGCAAATTTTATTCAAAAAAAAGCACTACATAAAGTAGAGGCAGACAGATCTAAGACTTACAAATTTAAA
TTTAAAGGCCTCAACAGGGCCAGACAACACAATCCTTTCACATAAACCCAATCCAGTCCCATAGGGAGCTTAGAAACCACCACGAAGGCGCAAGACCAGG
TGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATCC
CTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTG
CATCCCACCACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTCCTCGAGCTGCTTCCCAGCAAAG
ATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACTTCCAGGGTTATGGTTT
TACCCGTCAGGGTCTTGACAAAGATTTGCATCCCACCACGGAGACGTAGGACAAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAATCCGCTAAGGTTCG
GCCGTCCTCGAGCTGCTTCCCAGCAAAGATCAGCCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCG
GAGCTTTCGACTTCCAGGGTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATCCCACCACGTAGACGGAGGACGAGGTGGAGAGTCGACTCCT
TCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGAT
CTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCTTGCCGGTGAGTGTCTTAACGAAGATCTGCATCTTGTTTGCGTGA
ACAGAAAACCTACAAAGTAAATATCAGAGAAATTAAACCACTCGGGATG