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Detailed information on CNT30322408


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697144Asparagus officinalisOryza sativa20.7122.1782.78180forward
CNT30317005Asparagus officinalisCorylus avellana11.6236.0783.17101forward
CNT30380061Asparagus officinalisManihot esculenta20.647.4879.89179forward
CNT30630708Asparagus officinalisVigna unguiculata19.164.5981.93166forward
CNT30184672Asparagus officinalisSecale cereale1642.1285.61139forward
CNT30297056Asparagus officinalisTriticum aestivum16.842.6984.93146forward
CNT30390869Asparagus officinalisTriticum turgidum16.831.0685.62146forward
CNT30438779Asparagus officinalisAegilops tauschii16.823.1484.93146forward
CNT30249379Asparagus officinalisAvena sativa16.836.7884.93146forward
CNT30662842Asparagus officinalisTriticum dicoccoides16.826.1285.62146forward
CNT3061832Asparagus officinalisArabidopsis lyrata19.4555.0579.29169forward
CNT30264219Asparagus officinalisBrassica rapa12.7722.1181.98111forward
CNT30135675Asparagus officinalisLolium perenne16.838.5284.25146forward
CNT30371307Asparagus officinalisOryza glumipatula23.5918.9383.9205forward
CNT30151052Asparagus officinalisBrachypodium distachyon10.9340.9588.4295forward
CNT30104243Asparagus officinalisOryza rufipogon20.7133.3382.78180forward
CNT30578121Asparagus officinalisOryza barthii23.5924.9783.9205forward
CNT30117952Asparagus officinalisOryza nivara20.614.482.68179forward

Expression of CNT30322408

Peptides detected in this lncRNA

>peptide 1 (44 aa)
KNSATRFDNILLFYLSIYTYIFFQAITHNLQISPYILLICQHKS*

>peptide 2 (32 aa)
MASRPFLISFTLRIAAWSGSLASPNGSNGPPG*

>peptide 3 (32 aa)
MGLRDEACPPNPTRNPKIFSKATRDQQSLLLK*

>peptide 4 (31 aa)
KTPPQDLIIFYYFIYLFIHIYFFRLLHTTYK*

>peptide 5 (80 aa)
MPYSFSTVMTILKDICRHCFHYFFCFVCKKKSWGVFIFNKCLSDHNITTVSVGHQYKTYNIYNLKQIIFNLISGADLSLEF

Sequence

>CNT30322408
GAAAAACTCCGCCACAAGATTTGATAATATTTTATTATTTTATTTATCTATTTATACATATATATTTTTTCAGGCTATTACACACAACTTACAAATAAGT
CCCTATATATTACTAATATGTCAACATAAATCCTAAACAATAATAAAACAAACAATTTCTCAGACTGATAACACCTTAATCCAGAAAACCGTTACACGAA
TCATAGCCTTTAATCTTCTCATTATAATTTACAACACATGGGTCTCTAAAAAACAACAGTTCAATTCAATTCAGAGGAAGTTTACAAAGTAGGAACTCTC
TCAGCTCCACTGGAGAGTACGGTGAGCAGATTGTTTCCGAAGGGGTTCTCCACAGGGCCTTCTCCTGTGACATAGGCCTGCAAGAAGAATCCTAGCATCG
CAAACATGGCCAGTCGCCCATTCTTGATCTCCTTCACCTTGAGGATCGCAGCTTGGTCGGGGTCGTTGGCGAGCCCTAACGGGTCGAATGGGCCTCCGGG
ATGAAGCTTGTCCTCCAAATCCTACAAGAAATCCGAAAATATTTAGTAAGGCGACTCGTGATCAGCAATCTTTACTGTTAAAGTAGCGTTGCAAGAATGT
GAGACGTATCAGCTATGATTATTCATGCCATACTCATTTTCTACTGTGATGACCATCTTGAAAGATATTTGTAGGCATTGTTTCCATTATTTTTTTTGTT
TCGTATGCAAAAAAAAATCTTGGGGGGTGTTCATTTTCAATAAATGCTTATCAGATCATAATATTACCACAGTCAGTGTGGGACATCAGTATAAAACTTA
TAATATATATAATTTGAAGCAAATTATTTTCAATCTAATTTCAGGTGCTGATTTGAGCTTAGAATTTAC