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Detailed information on CNT30321864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711848Asparagus officinalisGlycine max25.1123.4381.9116forward
CNT30544306Asparagus officinalisBrassica napus26.4134.9683.61122forward
CNT30479805Asparagus officinalisArabidopsis halleri21.8633.2284.16101forward
CNT30481599Asparagus officinalisChara braunii21.4322.384.8599forward

Expression of CNT30321864

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PPQDLIIFYYFIYLFIHIYFFRLLHTTYK*

>peptide 2 (41 aa)
ATRFDNILLFYLSIYTYIFFQAITHNLQISPYILLICQHKS*

Sequence

>CNT30321864
CCGCCACAAGATTTGATAATATTTTATTATTTTATTTATCTATTTATACATATATATTTTTTCAGGCTATTACACACAACTTACAAATAAGTCCCTATAT
ATTACTAATATGTCAACATAAATCCTAAACAATAATAAAACAAACAATTTCTCAGACTGATAACACCTTAATCCAGAAAACCGTTACACGAATCATAGCC
TTTAATCTTCTCATTATAATTTACAACACATGGGTCTCTAAAAAACAACAGTTCAATTCAATTCAGAGGAAGTTTACAAAGTAGGAACTCTCTCAGCTCC
ACTGGAGAGTACGGTGAGATGTGAGGTTCTCCACAGGGCCTTCTCCTGTGACATAGGCCTGCAAGAAGAATCCTAGCATCGCAAACATGGCCAGTCGCCC
ATTCTTGATCTCCTTCACCTTGAGGATCGCAGCTTGGTCGGGGTCGTTGGCGAGCCCTAACG