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Detailed information on CNT30321826


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A2H5AIY6|PAL2_NARPS, E-value = 2e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30573527Asparagus officinalisVitis vinifera20.515.2486.2580forward

Expression of CNT30321826

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MRTSIAARVAEVDSMLPDSLPEPKIPAFRNLKQRRSHQNFDLCVCARINLIVISSKIGVA

>peptide 2 (47 aa)
MVPRRGRQGVMLALRKEEMVPRRGRQGVMLALRKEVMASRISKRMPE*

Sequence

>CNT30321826
AGCATTCCGGCGATGTAGGAGAGAGGGACAAGGTCGCCGGAGGAGGAGATGGTTCCTCGGAGGGGTAGGCAGGGCGTGATGTTGGCGTTGAGGAAGGAGG
AGATGGTTCCTCGGAGGGGTAGGCAGGGCGTGATGTTGGCGTTGAGGAAGGAGGTGATGGCTTCCAGGATTTCGAAGCGGATGCCGGAGTAGCCCTGGAG
GAGGGTGTTGATGCGGACGAGCATTGCGGCTCGAGTGGCAGAGGTCGACAGCATGTTACCGGATTCTCTGCCGGAGCCGAAGATTCCGGCGTTTAGGAAT
CTGAAGCAAAGAAGATCTCATCAGAATTTTGACTTGTGTGTGTGCGCGCGCATCAACCTTATTGTTATTAGTTCAAAAATAGGAGTTGCA