Detailed information on CNT30321600


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671080Asparagus officinalisSetaria viridis26.3415.1788.8954forward
CNT30521445Asparagus officinalisSetaria italica26.345.9390.7454forward
CNT30554109Asparagus officinalisOryza glaberrima29.2712.079060forward
CNT30583094Asparagus officinalisEchinochloa crusgalli26.3426.8792.5954forward

Expression of CNT30321600

Peptides detected in this lncRNA

>peptide 1 (40 aa)
QLQLQYKVITQMDVYIYVRAEMVEPTAAKTKRKVEMNSAA*

>peptide 2 (57 aa)
TVTTAVQSDHTDGCVYIRTSRDGGANGGEDEEEGGDELGGVRAESGTREATLELRSH*

Sequence

>CNT30321600
ACAGTTACAACTGCAGTACAAAGTGATCACACAGATGGATGTGTATATATACGTACGAGCCGAGATGGTGGAGCCAACGGCGGCGAAGACGAAGAGGAAG
GTGGAGATGAACTCGGCGGCGTAAGAGCGGAGAGCGGGACCAGAGAAGCAACGTTGGAATTGAGAAGCCATTGAAGGGAACTGAGATTTTGGTGATTGAG
TTTGA