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Detailed information on CNT3032157


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-160

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30490421Theobroma cacaoOlea europaea75.2742.3182.92685forward
CNT30609955Theobroma cacaoGossypium raimondii76.9275.0385.71700forward
CNT30574249Theobroma cacaoVitis vinifera62.0956.8483.89565forward

Expression of CNT3032157

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MKCRLFLNVIISQSSAVLELLPSKDQPLLVRWDSFLVLDLGLHVVDGVGAFDFQGYRLTRQGLDEDLHPTT*

>peptide 2 (40 aa)
MVSELSTSRVIVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 3 (31 aa)
MVSELSTSKVMVFPVRVLTKICIPPRSLKTK*

>peptide 4 (45 aa)
KKTDSSKYANFIQKKALHKVEADRSKTYKFKFKGLNRARQHNPFT*

Sequence

>CNT3032157
AAAGAAGACAGATAGCAGTAAATATGCAAATTTTATTCAAAAAAAAGCACTACATAAAGTAGAGGCAGACAGATCTAAGACTTACAAATTTAAATTTAAA
GGCCTCAACAGGGCCAGACAACACAATCCTTTCACATAAACCCAATCCAGTCCCATAGGGAGCTTAGAAACCACCACGAAGGCGCAAGACCAGGTGAAGG
GTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCCT
TGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCATCCC
ACCACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATCAGC
CTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATCGTCTTACCCG
TCAGGGTCTTGACGAAGATCTGCATCCCACCACGTAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTC
CTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTC
TCGACTTCGAGGGTGATTGTCTTGCCGGTGAGTGTCTTAACGAAGATCTGCATCTTGTTTGCGTGAACAGAAAACCTACAAAGTAAATATCAGAGAAATT
AAACCACTCG